RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 PDCD11Q14690 1871 aaKnown RBP9.62□□□□□ -0.87
TNFAIP3-208ENST00000615468 ALPK3Q96L96 1907 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 H3BSH0 61 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 K7ERQ8 282 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 CPT2P23786 658 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 ABCD3P28288 659 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 SDHAP31040 664 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 EEF1A1P68104 462 aaKnown RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 HABP2Q14520 560 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 TP53I3Q53FA7 332 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 NCMAPQ5T1S8 102 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 EEF1A1P5Q5VTE0 462 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 PRPF38BQ5VTL8 546 aaKnown RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 LYPLAL1Q5VWZ2 237 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 FIGNL1Q6PIW4 674 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 NRMQ8IXM6 262 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 INO80EQ8NBZ0 244 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR2T33Q8NG76 320 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR4Q3Q8NH05 313 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 HSPA12BQ96MM6 686 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR14A2Q96R54 314 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 SCML2Q9UQR0 700 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 RTCAO00442 366 aaKnown RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR2T1O43869 369 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 PRKRAO75569 313 aaKnown RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 RBBP9O75884 186 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 IGHV2-70P01814 119 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 LIPCP11150 499 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 GPX4P36969 197 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 SHC2P98077 582 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 CBFBQ13951 182 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR7A5Q15622 319 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 TCTN1Q2MV58 587 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 UBE2NLQ5JXB2 153 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 GLT8D1Q68CQ7 371 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 UQCC3Q6UW78 93 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 MOB3CQ70IA8 216 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 CYB561A3Q8NBI2 242 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 TET1Q8NFU7 2136 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 SYNPRQ8TBG9 265 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 RELTQ969Z4 430 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 OTUB2Q96DC9 234 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 LCORQ96JN0 433 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZNF230Q9UIE0 474 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZNF821O75541 412 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 NDUFB6O95139 128 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 GYPBP06028 91 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 GTF2F2P13984 249 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 RPA2P15927 270 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 BMP7P18075 431 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 ADCYAP1P18509 176 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 SRSF3P84103 164 aaKnown RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 SKP2Q13309 424 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 PGGHGQ32M88 737 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 PLEKHN1Q494U1 663 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 AADACL4Q5VUY2 407 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 NDUFAF7Q7L592 441 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 FAM98AQ8NCA5 519 aaKnown RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZDHHC3Q9NYG2 299 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 EPHA6Q9UF33 1036 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 MOKQ9UQ07 419 aa9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 NOP16Q9Y3C1 178 aaKnown RBP9.61□□□□□ -0.87
TNFAIP3-208ENST00000615468 A0A0G2JK05 382 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZNF729A6NN14 1252 aaPredicted RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 CCSO14618 274 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 GPR37O15354 613 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 FBP1P09467 338 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 NME1P15531 152 aaKnown RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 DDX6P26196 483 aaKnown RBP eCLIP9.6□□□□□ -0.872e-8■■■□□ 17.7
TNFAIP3-208ENST00000615468 AQP2P41181 271 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 TSPAN31Q12999 210 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 CCSMST1Q4G0I0 132 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 FAM76BQ5HYJ3 339 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 ENTPD8Q5MY95 495 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 RFLNAQ6ZTI6 216 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 TAF8Q7Z7C8 310 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR52L1Q8NGH7 329 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 NEIL2Q969S2 332 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 WDR13Q9H1Z4 485 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 TRPV4Q9HBA0 871 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 SMCO4Q9NRQ5 59 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 CXXC1Q9P0U4 656 aaPredicted RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 P2RX2Q9UBL9 471 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 DENND4AQ7Z401 1863 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 TMEM82A0PJX8 343 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 M0R036 132 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 SURF4O15260 269 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 SLC16A8O95907 504 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 IL5P05113 134 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 APEHP13798 732 aaKnown RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 HSD3B2P26439 372 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 AIMP2Q13155 320 aaKnown RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 IRF5Q13568 498 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 TGIF1Q15583 401 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 PRRT3Q5FWE3 981 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR52W1Q6IF63 320 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 GRHL2Q6ISB3 625 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 SKA3Q8IX90 412 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR10H5Q8NGA6 315 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms