RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 AFF3P51826 1226 aaKnown RBP20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 YPEL5P62699 121 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 GNA13Q14344 377 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 GK2Q14410 553 aaPredicted RBP20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 OR11G2Q8NGC1 345 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 COQ8AQ8NI60 647 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 OR1E3Q8WZA6 343 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 WDR92Q96MX6 357 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 SMOC1Q9H4F8 434 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 GPN1Q9HCN4 374 aaPredicted RBP20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 MED11Q9P086 117 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 TNRC6BQ9UPQ9 1833 aaKnown RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 PATE3B3GLJ2 98 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 SUSD5O60279 629 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 POP7O75817 140 aaKnown RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 SC5DO75845 299 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 GBAP04062 536 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 KLK1P06870 262 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 ANKRD34CP0C6C1 535 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 C1GALT1C1LP0DN25 315 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 PPP2R1BP30154 601 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 KIAA1024LP59773 190 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 RPS26P62854 115 aaKnown RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 MAPK14Q16539 360 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 ZC3H14Q6PJT7 736 aaKnown RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 GLDNQ6ZMI3 551 aaPredicted RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 Q6ZTK2 550 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 CFAP206Q8IYR0 622 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 UBE2E3Q969T4 207 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 SAV1Q9H4B6 383 aaPredicted RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 ZCCHC4Q9H5U6 513 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 BCL2L10Q9HD36 194 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 PURGQ9UJV8 347 aaKnown RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 PLEKHM1Q9Y4G2 1056 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 NINQ8N4C6 2090 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 A0A087WUU8 490 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 SPTY2D1-AS1A0A0U1RR47 76 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 PRSS38A1L453 326 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 PRR23D1E9PI22 279 aaPredicted RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 LGALS8O00214 317 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 DVL2O14641 736 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 STX11O75558 287 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 HIST1H2ABP04908 130 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 PRR23D2P0DMB1 279 aaPredicted RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 MECP2P51608 486 aaKnown RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 FZD2Q14332 565 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 SLBPQ14493 270 aaKnown RBP eCLIP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 HIST3H2AQ7L7L0 130 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 ZNF454Q8N9F8 522 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 OR5M9Q8NGP3 310 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 OR1S1Q8NH92 325 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 SMPDL3AQ92484 453 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 RAB8BQ92930 207 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 HIST1H2ACQ93077 130 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 ZNF764Q96H86 408 aaPredicted RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 ZNF514Q96K75 400 aaPredicted RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 SLC38A3Q99624 504 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 TCEAL2Q9H3H9 227 aaPredicted RBP20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 SLC17A4Q9Y2C5 497 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 DYRK1BQ9Y463 629 aa20.25■□□□□ 0.83
POLR2J3-220ENST00000613744 CACNA1HO95180 2353 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 TRAV1-2A0A0B4J238 106 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 A0A1B0GTQ1 180 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 NUPL2O15504 423 aaKnown RBP20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 SDC3O75056 442 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 ADAM11O75078 769 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 CFIP05156 583 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 GNSP15586 552 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 SEC61A1P61619 476 aaKnown RBP20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 FGL1Q08830 312 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 KRT33BQ14525 404 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 TRAM2Q15035 370 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 PGGHGQ32M88 737 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 CNOT9Q92600 299 aaKnown RBP20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 TMEM159Q96B96 161 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 MRPS24Q96EL2 167 aaKnown RBP20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 DDX31Q9H8H2 851 aaKnown RBP20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 GPR34Q9UPC5 381 aa20.24■□□□□ 0.83
POLR2J3-220ENST00000613744 A0A1B0GVC2 190 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 A6NIN4 97 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 FAM25EA8MYX2 175 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 TGFB1P01137 390 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 RAB3BP20337 219 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 GDNFP39905 211 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 FRKP42685 505 aaPredicted RBP20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 CCR8P51685 355 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 MANFP55145 182 aaKnown RBP20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 MAZP56270 477 aaKnown RBP20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 OR10A3P58181 314 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 ALG11Q2TAA5 492 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 PDSS1Q5T2R2 415 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 TMUB2Q71RG4 321 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 LRRTM4Q86VH4 590 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 LINC00469Q8N7U9 141 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 OR5W2Q8NH69 310 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 ALG8Q9BVK2 526 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 ARRDC1-AS1Q9H2J1 176 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 TAS2R5Q9NYW4 299 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 AHSPQ9NZD4 102 aa20.23■□□□□ 0.83
POLR2J3-220ENST00000613744 SLC23A2Q9UGH3 650 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms