RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 OR1E2P47887 323 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 DIO1P49895 249 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 ADORA2A-AS1P86434 159 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 MYBPHQ13203 477 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 TRIM25Q14258 630 aaKnown RBP11.9□□□□□ -0.5
MDC1-209ENST00000613547 NPTX1Q15818 432 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 EEF1A1P5Q5VTE0 462 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 GTF2IRD2BQ6EKJ0 949 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 XKRXQ6PP77 449 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 CLEC18BQ6UXF7 455 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 CCDC121Q6ZUS5 278 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 NCCRP1Q6ZVX7 275 aaPredicted RBP11.9□□□□□ -0.5
MDC1-209ENST00000613547 MRGPRGQ86SM5 289 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 GTF2IRD2Q86UP8 949 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 RBM45Q8IUH3 476 aaKnown RBP11.9□□□□□ -0.5
MDC1-209ENST00000613547 MARVELD2Q8N4S9 558 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 CLEC18CQ8NCF0 446 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 OR4D11Q8NGI4 311 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 FNDC9Q8TBE3 224 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 STK35Q8TDR2 534 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 ADAMTS16Q8TE57 1224 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 POP5Q969H6 163 aaKnown RBP11.9□□□□□ -0.5
MDC1-209ENST00000613547 SLC38A4Q969I6 547 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 MCUR1Q96AQ8 359 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 SDCCAG3Q96C92 435 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 SLC7A6OSQ96CW6 309 aaPredicted RBP11.9□□□□□ -0.5
MDC1-209ENST00000613547 ZNF845Q96IR2 970 aaPredicted RBP11.9□□□□□ -0.5
MDC1-209ENST00000613547 MPP4Q96JB8 637 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 WFDC6Q9BQY6 131 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 PRR14Q9BWN1 585 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 TAPBPLQ9BX59 468 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 POTEKPQ9BYX7 375 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 TRIM15Q9C019 465 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 OR11A1Q9GZK7 315 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 COQ10BQ9H8M1 238 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 TRAPPC4Q9Y296 219 aa11.9□□□□□ -0.5
MDC1-209ENST00000613547 ZGRF1Q86YA3 2104 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 TMEM229AB2RXF0 380 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 DVL2O14641 736 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 CHP2O43745 196 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 TPST2O60704 377 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 EIF1BO60739 113 aaKnown RBP11.89□□□□□ -0.51
MDC1-209ENST00000613547 PDE5AO76074 875 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 PMS2P2O95744 297 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 CRHP06850 196 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 TMIGD3P0DMS9 266 aaPredicted RBP11.89□□□□□ -0.51
MDC1-209ENST00000613547 ENPP1P22413 925 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 CEACAM8P31997 349 aaPredicted RBP11.89□□□□□ -0.51
MDC1-209ENST00000613547 CDH12P55289 794 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 TAS2R41P59536 307 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 ZNF239Q16600 458 aaKnown RBP11.89□□□□□ -0.51
MDC1-209ENST00000613547 MTX3Q5HYI7 312 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 C1orf140Q5VVS0 124 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 SEM1Q6ZVN7 128 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 VTCN1Q7Z7D3 282 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 CYP4Z1Q86W10 505 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 DHFR2Q86XF0 187 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 SLC43A2Q8N370 569 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 C9orf106Q8NAJ2 232 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 CA5BP1Q8WTZ4 195 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 CCDC124Q96CT7 223 aaKnown RBP11.89□□□□□ -0.51
MDC1-209ENST00000613547 ASB9Q96DX5 294 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 SLC41A3Q96GZ6 507 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 ARL5BQ96KC2 179 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 LRGUKQ96M69 825 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 EPYCQ99645 322 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 GLRX2Q9NS18 164 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 RNF6Q9Y252 685 aa11.89□□□□□ -0.51
MDC1-209ENST00000613547 FAM32AQ9Y421 112 aaKnown RBP11.89□□□□□ -0.51
MDC1-209ENST00000613547 USP9XQ93008 2570 aaPredicted RBP11.89□□□□□ -0.51
MDC1-209ENST00000613547 A0A087WUJ7 227 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 A0A0G2JNJ9 132 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 WIPF3A6NGB9 483 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 OR2T1O43869 369 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 PRKD3O94806 890 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 TOXO94900 526 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 RCBTB2O95199 551 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 OR5F1O95221 314 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 TGM6O95932 706 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 GPIP06744 558 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 THRBP10828 461 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 ITGA2P17301 1181 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 CTSSP25774 331 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 GTF2E2P29084 291 aaKnown RBP11.88□□□□□ -0.51
MDC1-209ENST00000613547 OPRM1P35372 400 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 OR2B6P58173 313 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 SLC35A1P78382 337 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 SRSF1Q07955 248 aaKnown RBP eCLIP11.88□□□□□ -0.51
MDC1-209ENST00000613547 RNPS1Q15287 305 aaKnown RBP11.88□□□□□ -0.51
MDC1-209ENST00000613547 FCRLAQ7L513 359 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 CCDC71Q8IV32 467 aaPredicted RBP11.88□□□□□ -0.51
MDC1-209ENST00000613547 ITLN2Q8WWU7 325 aaPredicted RBP11.88□□□□□ -0.51
MDC1-209ENST00000613547 INTS12Q96CB8 462 aaKnown RBP11.88□□□□□ -0.51
MDC1-209ENST00000613547 PYURFQ96I23 114 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 PRRC1Q96M27 445 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 TACO1Q9BSH4 297 aaKnown RBP11.88□□□□□ -0.51
MDC1-209ENST00000613547 SFXN3Q9BWM7 321 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 SRXN1Q9BYN0 137 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 MMADHCQ9H3L0 296 aaPredicted RBP11.88□□□□□ -0.51
MDC1-209ENST00000613547 RNF122Q9H9V4 155 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms