RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TAS2R5Q9NYW4 299 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 PHOX2AO14813 284 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SLC6A8P48029 635 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 DAP3P51398 398 aaKnown RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 SH3BP2P78314 561 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 GPR17Q13304 367 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 B3GNT9Q6UX72 402 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 C6orf120Q7Z4R8 191 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SAT2Q96F10 170 aaPredicted RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 DNAJC5Q9H3Z4 198 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 PDE7BQ9NP56 450 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SIRT7Q9NRC8 400 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 TIMM8BQ9Y5J9 83 aaPredicted RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 SCN1AP35498 2009 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 OR6C68A6NDL8 312 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 PRAMEF11O60813 436 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 OPN1MWP04001 364 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 OPN1MW2P0DN77 364 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 OPN1MW3P0DN78 364 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 NME1P15531 152 aaKnown RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 PTTG1IPP53801 180 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 PPP1R8Q12972 351 aaKnown RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 GRIK5Q16478 980 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 PGGHGQ32M88 737 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 PRSS35Q8N3Z0 413 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 C2CD4CQ8TF44 421 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 CDS1Q92903 461 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 HEATR5AQ86XA9 2040 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 NAA10P41227 235 aaPredicted RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 SAXO2Q658L1 398 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 KCNG3Q8TAE7 436 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SRRQ9GZT4 340 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 SNCGO76070 127 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 GABRR2P28476 465 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 DVL1P1P54792 670 aaPredicted RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 TAS2R38P59533 333 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 CNN3Q15417 329 aaKnown RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 PAGE3Q5JUK9 113 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 C5orf46Q6UWT4 87 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 Q8N9G6 341 aaPredicted RBP8.23□□□□□ -1.09
TTC28-208ENST00000612946 ZNF337Q9Y3M9 751 aa8.23□□□□□ -1.09
TTC28-208ENST00000612946 ZNF207O43670 478 aaKnown RBP8.22□□□□□ -1.09
TTC28-208ENST00000612946 ZNF157P51786 506 aaPredicted RBP8.22□□□□□ -1.09
TTC28-208ENST00000612946 RHBDL3P58872 404 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 GHRHRQ02643 423 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 ZP2Q05996 745 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 FAM182BQ5T319 152 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 OR8J2Q8NGG1 315 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 CCDC74AQ96AQ1 378 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 ECHDC3Q96DC8 303 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 LGALS8O00214 317 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 ITGB5P18084 799 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 SLC11A1P49279 550 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 SLC35A2P78381 396 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 ZNF154Q13106 437 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 CLINT1Q14677 625 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 Q499Y3 187 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 OR51T1Q8NGJ9 327 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 TMEM174Q8WUU8 243 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 YIPF6Q96EC8 236 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 PLEKHJ1Q9NW61 149 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 MYO16Q9Y6X6 1858 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 KCNJ13O60928 360 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 PSMB6P28072 239 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 LTB4RQ15722 352 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 EML3Q32P44 896 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 OR51Q1Q8NH59 317 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 FAM110BQ8TC76 370 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 UCN3Q969E3 161 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 ZNF426Q9BUY5 554 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 B3GALT1Q9Y5Z6 326 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 SMIM10L2AP0DMW4 78 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 SMIM10L2BP0DMW5 78 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 CASP9P55211 416 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 ZNF322Q6U7Q0 402 aaPredicted RBP8.22□□□□□ -1.09
TTC28-208ENST00000612946 WDR5BQ86VZ2 330 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 PLA2G15Q8NCC3 412 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 RASD2Q96D21 266 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 TEPSINQ96N21 525 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 MUTYHQ9UIF7 546 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 NSA2O95478 260 aaKnown RBP8.22□□□□□ -1.09
TTC28-208ENST00000612946 PDGFBP01127 241 aaPredicted RBP8.22□□□□□ -1.09
TTC28-208ENST00000612946 NAT2P11245 290 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 ADRA2CP18825 462 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 KCNJ3P48549 501 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 NFATC2Q13469 925 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 AFMIDQ63HM1 303 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 C18orf63Q68DL7 685 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 DPF1Q92782 380 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 PEBP4Q96S96 227 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 DUSP21Q9H596 190 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 MRPL15Q9P015 296 aaKnown RBP8.22□□□□□ -1.09
TTC28-208ENST00000612946 ADAM29Q9UKF5 820 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 PCDHGA6Q9Y5G7 932 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 RIMBP3CA6NJZ7 1639 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 RIMBP3BA6NNM3 1639 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 RIMBP3Q9UFD9 1639 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 FBXO24O75426 580 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 OR12D1P0DN82 309 aa8.22□□□□□ -1.09
TTC28-208ENST00000612946 GNSP15586 552 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms