RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CA13Q8N1Q1 262 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 SLC25A45Q8N413 288 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 UPRTQ96BW1 309 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 TBX5Q99593 518 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDH1-213ENST00000612417 SLA2Q9H6Q3 261 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 SOHLH2Q9NX45 425 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 PAQR5Q9NXK6 330 aaPredicted RBP13.52□□□□□ -0.25
CDH1-213ENST00000612417 EXTL2Q9UBQ6 330 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 ALG5Q9Y673 324 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 MUC3AQ02505 3323 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 GXYLT2A0PJZ3 443 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 CENPBD1B2RD01 187 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 FAM25AB3EWG3 89 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 FAM25CB3EWG5 89 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 FAM25GB3EWG6 89 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 REM1O75628 298 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 RFPL3O75679 317 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 GFERP55789 205 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 OR1D5P58170 312 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ACTC1P68032 377 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ACTA1P68133 377 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 PMS2CLQ68D20 193 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 VASH1Q7L8A9 365 aaPredicted RBP13.51□□□□□ -0.25
CDH1-213ENST00000612417 OAFQ86UD1 273 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 C1orf210Q8IVY1 113 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 TEX19Q8NA77 164 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 OR5T3Q8NGG3 340 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 OR4C6Q8NH72 309 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 DOK4Q8TEW6 326 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 PIGKQ92643 395 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ANKRD9Q96BM1 317 aaPredicted RBP13.51□□□□□ -0.25
CDH1-213ENST00000612417 TCTN2Q96GX1 697 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ART5Q96L15 291 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 LRFN5Q96NI6 719 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ELF4Q99607 663 aaPredicted RBP13.51□□□□□ -0.25
CDH1-213ENST00000612417 PPIL3Q9H2H8 161 aaKnown RBP13.51□□□□□ -0.25
CDH1-213ENST00000612417 NLKQ9UBE8 527 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 TRAV27A0A087WT01 109 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 A0A0G2JMP0 313 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 A0A0X1KG70 313 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ORC5O43913 435 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 CBX7O95931 251 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 CTSBP07858 339 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 PEPDP12955 493 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 MYF5P13349 255 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 HK1P19367 917 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 SHC1P29353 583 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 NOS3P29474 1203 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 INPP1P49441 399 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ZNF85Q03923 595 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 DMKNQ6E0U4 476 aaPredicted RBP13.51□□□□□ -0.25
CDH1-213ENST00000612417 SFXN4Q6P4A7 337 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ARHGAP11AQ6P4F7 1023 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ARL9Q6T311 187 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 RTL4Q6ZR62 310 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ZAR1Q86SH2 424 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 SHISA5Q8N114 240 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 LSMEM1Q8N8F7 131 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 OR4M2Q8NGB6 313 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 CREB3L1Q96BA8 519 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 ZDHHC12Q96GR4 267 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 PGLYRP3Q96LB9 341 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 TMEM246Q9BRR3 403 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 LMF2Q9BU23 707 aaKnown RBP13.51□□□□□ -0.25
CDH1-213ENST00000612417 FLRT3Q9NZU0 649 aa13.51□□□□□ -0.25
CDH1-213ENST00000612417 A0A0C4DFX4 3053 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 RP1P56715 2156 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 A0A0G2JK05 382 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 A0A1B0GWA3 101 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 E9PI62 339 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 SLC35E2P0CK97 266 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 TDGF1P13385 188 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 NPR2P20594 1047 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 ERP29P30040 261 aaKnown RBP13.5□□□□□ -0.25
CDH1-213ENST00000612417 TALDO1P37837 337 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 ACAA2P42765 397 aaKnown RBP13.5□□□□□ -0.25
CDH1-213ENST00000612417 RAB38P57729 211 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 RPS7P62081 194 aaKnown RBP13.5□□□□□ -0.25
CDH1-213ENST00000612417 CTAG1AP78358 180 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 CD83Q01151 205 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 FHL1Q13642 323 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 CRMP1Q14194 572 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 YIF1BQ5BJH7 314 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 UTS2BQ765I0 119 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 GLCCI1Q86VQ1 547 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 SLC35F3Q8IY50 421 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 ESX1Q8N693 406 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 SPERTQ8NA61 448 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 ABHD4Q8TB40 342 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 CNOT9Q92600 299 aaKnown RBP13.5□□□□□ -0.25
CDH1-213ENST00000612417 TRIM63Q969Q1 353 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 C4orf36Q96KX1 117 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 TRIM2Q9C040 744 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 SLC7A5P2Q9GIP4 190 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 OR51V1Q9H2C8 321 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 FOLH1BQ9HBA9 442 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 ENAMQ9NRM1 1142 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 SUSD2Q9UGT4 822 aa13.5□□□□□ -0.25
CDH1-213ENST00000612417 SERTAD3Q9UJW9 196 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms