RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 VWA1Q6PCB0 445 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 C6orf89Q6UWU4 347 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 BTLAQ7Z6A9 289 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 STK32CQ86UX6 486 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 RANBP3LQ86VV4 465 aaPredicted RBP12.75□□□□□ -0.37
HDDC2-206ENST00000608461 CADM2Q8N3J6 435 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 ANKS4BQ8N8V4 417 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 STK35Q8TDR2 534 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 FAM222BQ8WU58 562 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 RCN3Q96D15 328 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 ZNF583Q96ND8 569 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 ZNF559Q9BR84 538 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 GPATCH1Q9BRR8 931 aaKnown RBP12.75□□□□□ -0.37
HDDC2-206ENST00000608461 RPS6KB2Q9UBS0 482 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
HDDC2-206ENST00000608461 DCHS2Q6V1P9 2916 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 TMEM72A0PK05 275 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 TUBAL3A6NHL2 446 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 ZNF724A8MTY0 619 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 TPST1O60507 370 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 GCM2O75603 506 aaPredicted RBP12.74□□□□□ -0.37
HDDC2-206ENST00000608461 DCTN3O75935 186 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 SMNDC1O75940 238 aaKnown RBP eCLIP12.74□□□□□ -0.37
HDDC2-206ENST00000608461 PNMTP11086 282 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 PRG2P13727 222 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 AQP1P29972 269 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 AGTR1P30556 359 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 KCNJ5P48544 419 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 NCALDP61601 193 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 H3F3AP84243 136 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 DMTNQ08495 405 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 RASGEF1BQ0VAM2 473 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 SWT1Q5T5J6 900 aaKnown RBP12.74□□□□□ -0.37
HDDC2-206ENST00000608461 ULK3Q6PHR2 472 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 BEND4Q6ZU67 534 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 LUZP2Q86TE4 346 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 ATG4DQ86TL0 474 aaPredicted RBP12.74□□□□□ -0.37
HDDC2-206ENST00000608461 ZNF295-AS1Q8N0V1 137 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 POU5F2Q8N7G0 328 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 OR52E4Q8NGH9 312 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 PIGXQ8TBF5 258 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 SLC26A7Q8TE54 656 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 ROBO4Q8WZ75 1007 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 C3orf49Q96BT1 292 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 ARL5BQ96KC2 179 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 NAA11Q9BSU3 229 aaPredicted RBP12.74□□□□□ -0.37
HDDC2-206ENST00000608461 GALNT8Q9NY28 637 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 FAM53CQ9NYF3 392 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 EMC3Q9P0I2 261 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 ITPR2Q14571 2701 aa12.74□□□□□ -0.37
HDDC2-206ENST00000608461 PKDREJQ9NTG1 2253 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 IGKV3D-15A0A087WSY6 115 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 FAM220BPB1ANY3 271 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 GPR171O14626 319 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 AIM2O14862 343 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 SMAD9O15198 467 aaKnown RBP12.73□□□□□ -0.37
HDDC2-206ENST00000608461 CNOT4O95628 575 aaKnown RBP12.73□□□□□ -0.37
HDDC2-206ENST00000608461 GPIP06744 558 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 FESP07332 822 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 IDUAP35475 653 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 CD79BP40259 229 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 RGS8P57771 180 aaPredicted RBP12.73□□□□□ -0.37
HDDC2-206ENST00000608461 SIRPAP78324 504 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 DUSP7Q16829 419 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 C8orf82Q6P1X6 216 aaPredicted RBP12.73□□□□□ -0.37
HDDC2-206ENST00000608461 PAQR6Q6TCH4 344 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 TREML1Q86YW5 311 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 OR2T12Q8NG77 320 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 ABHD3Q8WU67 409 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 LRRC37BQ96QE4 947 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 PSD2Q9BQI7 771 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 RSPO3Q9BXY4 272 aaPredicted RBP12.73□□□□□ -0.37
HDDC2-206ENST00000608461 OR11A1Q9GZK7 315 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 PIF1Q9H611 641 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 TMEM27Q9HBJ8 222 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 SELENONQ9NZV5 590 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 NDRG3Q9UGV2 375 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 BAG5Q9UL15 447 aa12.73□□□□□ -0.37
HDDC2-206ENST00000608461 ELOVL7A1L3X0 281 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 ELOA3DA6NLF2 546 aaPredicted RBP12.72□□□□□ -0.37
HDDC2-206ENST00000608461 TMEM229AB2RXF0 380 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 OR2T1O43869 369 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 NPIPB7O75200 414 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 FAM107AO95990 144 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 EPXP11678 715 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 CCNA2P20248 432 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 SLC16A1P53985 500 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 DAZAP2Q15038 168 aaPredicted RBP12.72□□□□□ -0.37
HDDC2-206ENST00000608461 NRF1Q16656 503 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 ELOA3BQ3SY89 546 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 GLIPR1L2Q4G1C9 344 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 ABLIM2Q6H8Q1 611 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 ZNF613Q6PF04 617 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 ZNF474Q6S9Z5 364 aaPredicted RBP12.72□□□□□ -0.37
HDDC2-206ENST00000608461 TUSC5Q8IXB3 177 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 SLC15A3Q8IY34 581 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 ZNF610Q8N9Z0 462 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 SMYD1Q8NB12 490 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 ELOA3Q8NG57 546 aa12.72□□□□□ -0.37
HDDC2-206ENST00000608461 SLC38A4Q969I6 547 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms