RNA–Protein interactions for RNA: ENST00000598346.5

FARP1-223, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-223ENST00000598346 XRCC1P18887 633 aaPredicted RBP4.28□□□□□ -1.72
FARP1-223ENST00000598346 PTBP1P26599 531 aaKnown RBP eCLIP4.28□□□□□ -1.72
FARP1-223ENST00000598346 GDF1P27539 372 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 HNRNPH3P31942 346 aaKnown RBP4.28□□□□□ -1.72
FARP1-223ENST00000598346 MDH2P40926 338 aaKnown RBP4.28□□□□□ -1.72
FARP1-223ENST00000598346 XCR1P46094 333 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 KRT6CP48668 564 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 QRICH1Q2TAL8 776 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 LINC01620Q4KN68 170 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 TMEM41BQ5BJD5 291 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 UTF1Q5T230 341 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 CBLN3Q6UW01 205 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 CYS1Q717R9 158 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 MYOCDQ8IZQ8 938 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 CD177Q8N6Q3 437 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 GMCL1P1Q8NEA9 526 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 CCDC26Q8TAB7 109 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 MRAPQ8TCY5 172 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 DYNLL2Q96FJ2 89 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 CDX2Q99626 313 aaPredicted RBP4.28□□□□□ -1.72
FARP1-223ENST00000598346 GPA33Q99795 319 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 FEM1AQ9BSK4 669 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 ZNF416Q9BWM5 594 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 BLZF1Q9H2G9 400 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 MED4Q9NPJ6 270 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 RNF14Q9UBS8 474 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 GMPPBQ9Y5P6 360 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 BZW2Q9Y6E2 419 aaKnown RBP4.28□□□□□ -1.72
FARP1-223ENST00000598346 LAMA2P24043 3122 aaKnown RBP4.28□□□□□ -1.72
FARP1-223ENST00000598346 DICER1Q9UPY3 1922 aaKnown RBP4.28□□□□□ -1.72
FARP1-223ENST00000598346 SLX4Q8IY92 1834 aa4.28□□□□□ -1.72
FARP1-223ENST00000598346 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 MPHOSPH10O00566 681 aaKnown RBP4.27□□□□□ -1.73
FARP1-223ENST00000598346 CALUO43852 315 aaPredicted RBP4.27□□□□□ -1.73
FARP1-223ENST00000598346 STX11O75558 287 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 CCDC172P0C7W6 258 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 PNMA6AP0CW24 399 aaPredicted RBP4.27□□□□□ -1.73
FARP1-223ENST00000598346 BCKDHAP12694 445 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 TCP1P17987 556 aaKnown RBP4.27□□□□□ -1.73
FARP1-223ENST00000598346 IGHV1-2P23083 117 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 CDH5P33151 784 aaPredicted RBP4.27□□□□□ -1.73
FARP1-223ENST00000598346 ASAH1Q13510 395 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 PEX6Q13608 980 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 SERTAD2Q14140 314 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 TGIF1Q15583 401 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 GSG1Q2KHT4 349 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 TMEM52BQ4KMG9 183 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 PAN3Q58A45 887 aaKnown RBP4.27□□□□□ -1.73
FARP1-223ENST00000598346 CCDC122Q5T0U0 273 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 CENPPQ6IPU0 288 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 LANCL3Q6ZV70 420 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 ZNF573Q86YE8 665 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 MCOLN2Q8IZK6 566 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 RNF10Q8N5U6 811 aaKnown RBP4.27□□□□□ -1.73
FARP1-223ENST00000598346 CCDC42Q96M95 316 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 MBOAT7Q96N66 472 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 MTMR9Q96QG7 549 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 GSDMCQ9BYG8 508 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 POLR3FQ9H1D9 316 aaPredicted RBP4.27□□□□□ -1.73
FARP1-223ENST00000598346 PSTPIP2Q9H939 334 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 COG4Q9H9E3 785 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 CALHM2Q9HA72 323 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 LZTFL1Q9NQ48 299 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 MIEF1Q9NQG6 463 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 DPM3Q9P2X0 92 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 SAR1BQ9Y6B6 198 aa4.27□□□□□ -1.73
FARP1-223ENST00000598346 COL4A5P29400 1685 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 EYSQ5T1H1 3165 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 FAM74A7A6NL05 159 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 CETN3O15182 167 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 DUX1O43812 170 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 N4BP1O75113 896 aaKnown RBP4.26□□□□□ -1.73
FARP1-223ENST00000598346 TRIM3O75382 744 aaPredicted RBP4.26□□□□□ -1.73
FARP1-223ENST00000598346 FLOT1O75955 427 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 NOL4O94818 638 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 LCA5LO95447 670 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 ANP32DO95626 131 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 HEXBP07686 556 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 GIG44P09565 113 aaPredicted RBP4.26□□□□□ -1.73
FARP1-223ENST00000598346 EPB41P11171 864 aaKnown RBP4.26□□□□□ -1.73
FARP1-223ENST00000598346 DESP17661 470 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 HOXD10P28358 340 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 ACAA2P42765 397 aaKnown RBP4.26□□□□□ -1.73
FARP1-223ENST00000598346 NOVA1P51513 510 aaKnown RBP4.26□□□□□ -1.73
FARP1-223ENST00000598346 CBX1P83916 185 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 CHI3L2Q15782 390 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 IL17AQ16552 155 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 FAM74A3Q4VXF1 159 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 HSP90AA4PQ58FG1 418 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 DCST2Q5T1A1 773 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 SLC22A10Q63ZE4 541 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 ASPHD2Q6ICH7 369 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 SCYL2Q6P3W7 929 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 LRRC70Q7Z2Q7 622 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 IFNEQ86WN2 208 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 C9orf40Q8IXQ3 194 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 CENPLQ8N0S6 344 aaPredicted RBP4.26□□□□□ -1.73
FARP1-223ENST00000598346 SLC35F6Q8N357 371 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 CSNK1A1LQ8N752 337 aa4.26□□□□□ -1.73
FARP1-223ENST00000598346 ZPLD1Q8TCW7 415 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms