RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ELOA3BQ3SY89 546 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 SAMD4BQ5PRF9 694 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 TMPPEQ6ZT21 453 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 LIX1LQ8IVB5 337 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 MCEMP1Q8IX19 187 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 RNF148Q8N7C7 305 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 LSMEM1Q8N8F7 131 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 ELOA3Q8NG57 546 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 RNF217Q8TC41 542 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 DNAJA4Q8WW22 397 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 ROBO4Q8WZ75 1007 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 LZICQ8WZA0 190 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 FAM162AQ96A26 154 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 DNAJA3Q96EY1 480 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 TPD52L3Q96J77 140 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 ARL5BQ96KC2 179 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 CDRT15Q96T59 188 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 WFDC6Q9BQY6 131 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 UCK2Q9BZX2 261 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 RNF122Q9H9V4 155 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 ZNF629Q9UEG4 869 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 PACSIN3Q9UKS6 424 aa17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 KLF2Q9Y5W3 355 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-214ENST00000597396 NKX2-6A6NCS4 301 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 IL18BPO95998 194 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 PLGP00747 810 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 CRHP06850 196 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 HTR1EP28566 365 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 AGFG1P52594 562 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 FOXF2Q12947 444 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 BNIP2Q12982 314 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 MYBPHQ13203 477 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 OR1Q1Q15612 314 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 ALG10BQ5I7T1 473 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 GTF2IRD2BQ6EKJ0 949 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 ATG4DQ86TL0 474 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 GTF2IRD2Q86UP8 949 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 CARM1Q86X55 608 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 CNEP1R1Q8N9A8 125 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 OR6T1Q8NGN1 323 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 ZHX1-C8orf76Q96EF9 292 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 SFXN3Q9BWM7 321 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 ADPRHL2Q9NX46 363 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 EGFL7Q9UHF1 273 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 SH3GLB1Q9Y371 365 aa17.6■□□□□ 0.41
SHKBP1-214ENST00000597396 ZC3H12DA2A288 527 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 A8MVM7 634 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 FMO6PO60774 539 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 PMS2P2O95744 297 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 NCK1P16333 377 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 TCN1P20061 433 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 ENPP1P22413 925 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 COL8A1P27658 744 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 OR2B6P58173 313 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 SIRPAP78324 504 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 EEF1A1P5Q5VTE0 462 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 ULK3Q6PHR2 472 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 FCRLAQ7L513 359 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 LSRQ86X29 649 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 RELL2Q8NC24 303 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 RBM15BQ8NDT2 890 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 OR4D11Q8NGI4 311 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 SLC47A1Q96FL8 570 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 C12orf10Q9HB07 376 aa17.59■□□□□ 0.41
SHKBP1-214ENST00000597396 IGHV3-15A0A0B4J1V0 119 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 A0A1W2PNV4 684 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 CPSF4LA6NMK7 179 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 TMEM229AB2RXF0 380 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 EEF1E1-BLOC1S5C9J1V9 151 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 EEF1E1O43324 174 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 TPST2O60704 377 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 ZNF682O95780 498 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 PNMTP11086 282 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 HSD17B1P14061 328 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 GGT1P19440 569 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 TNFRSF1BP20333 461 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 IDUAP35475 653 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 CTBP2P56545 445 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 SELENOWP63302 87 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 NPTX1Q15818 432 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 ENTPD8Q5MY95 495 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 GLYATQ6IB77 296 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 C6orf89Q6UWU4 347 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 RINLQ6ZS11 566 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 RBM45Q8IUH3 476 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 FAM156AQ8NDB6 213 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 RNF128Q8TEB7 428 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 POTEKPQ9BYX7 375 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 CLEC4AQ9UMR7 237 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 TRAPPC4Q9Y296 219 aa17.58■□□□□ 0.4
SHKBP1-214ENST00000597396 A0A0B4J2E0 115 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 A0A1B0GX12 115 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 UBOX5O94941 541 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 AHSA1O95433 338 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 SERPINA1P01009 418 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 T-ENOLP0DO92 83 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 CPOXP36551 454 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 RNPS1Q15287 305 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 ZNF787Q6DD87 383 aa17.57■□□□□ 0.4
SHKBP1-214ENST00000597396 ZNF613Q6PF04 617 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms