RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 SYNGR4O95473 234 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 CARD18P57730 90 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 CSNK2A1P68400 391 aaPredicted RBP12.89□□□□□ -0.35
VRK3-213ENST00000597215 C5orf46Q6UWT4 87 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 TMPPEQ6ZT21 453 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 ASRGL1Q7L266 308 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 P4HA3Q7Z4N8 544 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 CYP4Z1Q86W10 505 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 RPRMLQ8N4K4 120 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 STK35Q8TDR2 534 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 WNT2BQ93097 391 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 CPNE4Q96A23 557 aaPredicted RBP12.89□□□□□ -0.35
VRK3-213ENST00000597215 SLC41A3Q96GZ6 507 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 ARL5BQ96KC2 179 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 PRRC1Q96M27 445 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 TTYH2Q9BSA4 534 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 POTEKPQ9BYX7 375 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 CLCF1Q9UBD9 225 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 MCTS1Q9ULC4 181 aaKnown RBP12.89□□□□□ -0.35
VRK3-213ENST00000597215 SLC7A7Q9UM01 511 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 ZC3H12DA2A288 527 aaKnown RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 MBD3L4A6NDZ8 208 aaPredicted RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 MBD3L3A6NE82 208 aaPredicted RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 MBD3L5A6NJ08 208 aaPredicted RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 SLC22A20A6NK97 555 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 SULT2B1O00204 365 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 PMS2P2O95744 297 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 GLI4P10075 376 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 THRBP10828 461 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 FCGR2AP12318 317 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 ITGA2P17301 1181 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 DIO1P49895 249 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 NUP107P57740 925 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 RAC3P60763 192 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 PMPCAQ10713 525 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 MYBPHQ13203 477 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 PIN1Q13526 163 aaPredicted RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 FLOT2Q14254 428 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 PON3Q15166 354 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 RIPPLY2Q5TAB7 128 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 PPP4R4Q6NUP7 873 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 GDF7Q7Z4P5 450 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 TSPYL5Q86VY4 417 aaPredicted RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 MARVELD2Q8N4S9 558 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 MBD3L2Q8NHZ7 208 aaPredicted RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 RND1Q92730 232 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 ZHX1-C8orf76Q96EF9 292 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 CCDC120Q96HB5 630 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 ZNF845Q96IR2 970 aaPredicted RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 MPP4Q96JB8 637 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 TM9SF2Q99805 663 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 TMEM43Q9BTV4 400 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 SLC7A8Q9UHI5 535 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 RIMS3Q9UJD0 308 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 ERRFI1Q9UJM3 462 aaPredicted RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 POMPQ9Y244 141 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 FAM32AQ9Y421 112 aaKnown RBP12.88□□□□□ -0.35
VRK3-213ENST00000597215 ENPP4Q9Y6X5 453 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 KIAA1549Q9HCM3 1950 aa12.88□□□□□ -0.35
VRK3-213ENST00000597215 DIDO1Q9BTC0 2240 aaKnown RBP12.87□□□□□ -0.35
VRK3-213ENST00000597215 TCRBV5S2A0A599 114 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 AQP12BA6NM10 295 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 KDM4EB2RXH2 506 aaPredicted RBP12.87□□□□□ -0.35
VRK3-213ENST00000597215 DNPH1O43598 174 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 NPIPB7O75200 414 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 SEMA7AO75326 666 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 AGFG2O95081 481 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 LYPD3O95274 346 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 AHSA1O95433 338 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 IL2RAP01589 272 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 THY1P04216 161 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 SEMG1P04279 462 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 IDUAP35475 653 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 TIMP3P35625 211 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 OR2B6P58173 313 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 ST3GAL3Q11203 375 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 ZNF239Q16600 458 aaKnown RBP12.87□□□□□ -0.35
VRK3-213ENST00000597215 C1orf140Q5VVS0 124 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 SEM1Q6ZVN7 128 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 NCCRP1Q6ZVX7 275 aaPredicted RBP12.87□□□□□ -0.35
VRK3-213ENST00000597215 YTHDF3Q7Z739 585 aaKnown RBP12.87□□□□□ -0.35
VRK3-213ENST00000597215 AQP12AQ8IXF9 295 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 C9orf106Q8NAJ2 232 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 FNDC9Q8TBE3 224 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 C7orf34Q96L11 122 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 DOCK7Q96N67 2140 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 ZFP3Q96NJ6 502 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 EPYCQ99645 322 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 FNDC11Q9BVV2 318 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 TAPBPLQ9BX59 468 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 SRXN1Q9BYN0 137 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 PRRG4Q9BZD6 226 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 A4GNTQ9UNA3 340 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 MYO18BQ8IUG5 2567 aa12.87□□□□□ -0.35
VRK3-213ENST00000597215 UBR5O95071 2799 aaPredicted RBP12.86□□□□□ -0.35
VRK3-213ENST00000597215 IGKV1D-42A0A075B6H8 117 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 TRAV36DV7A0A075B6V5 113 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 J3KTA2 159 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms