RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ADA2Q9NZK5 511 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 SELENONQ9NZV5 590 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 TAGLN3Q9UI15 199 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 PACSIN3Q9UKS6 424 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ZC3H12DA2A288 527 aaKnown RBP9.91□□□□□ -0.82
LIG1-211ENST00000596457 ELOA3DA6NLF2 546 aaPredicted RBP9.91□□□□□ -0.82
LIG1-211ENST00000596457 CPSF4LA6NMK7 179 aaKnown RBP9.91□□□□□ -0.82
LIG1-211ENST00000596457 NME4O00746 187 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 SHOX2O60902 331 aaPredicted RBP9.91□□□□□ -0.82
LIG1-211ENST00000596457 IL18BPO95998 194 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 FESP07332 822 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 KLK2P20151 261 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 PTNP21246 168 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 CPOXP36551 454 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 KIR2DL2P43627 348 aaPredicted RBP9.91□□□□□ -0.82
LIG1-211ENST00000596457 KCNJ5P48544 419 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 RAC3P60763 192 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 CSNK2A1P68400 391 aaPredicted RBP9.91□□□□□ -0.82
LIG1-211ENST00000596457 MYBPHQ13203 477 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 OR1Q1Q15612 314 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 ELOA3BQ3SY89 546 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 HACD2Q6Y1H2 254 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 TMPPEQ6ZT21 453 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 BTLAQ7Z6A9 289 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 RANBP3LQ86VV4 465 aaPredicted RBP9.91□□□□□ -0.82
LIG1-211ENST00000596457 ELOA3Q8NG57 546 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 GPR32P1Q8NGA4 272 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 C3orf49Q96BT1 292 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 TAMM41Q96BW9 452 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 STARD4Q96DR4 205 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 ZHX1-C8orf76Q96EF9 292 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 TPD52L3Q96J77 140 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 MCHR1Q99705 422 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 ZNF559Q9BR84 538 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 RBM24Q9BX46 236 aaKnown RBP9.91□□□□□ -0.82
LIG1-211ENST00000596457 OPN3Q9H1Y3 402 aaPredicted RBP9.91□□□□□ -0.82
LIG1-211ENST00000596457 C12orf49Q9H741 205 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 RNF122Q9H9V4 155 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 PROCRQ9UNN8 238 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 AP3M1Q9Y2T2 418 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 EMC9Q9Y3B6 208 aa9.91□□□□□ -0.82
LIG1-211ENST00000596457 CELSR1Q9NYQ6 3014 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 A0A1B0GWA3 101 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 NDUFAB1O14561 156 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 TNFSF13O75888 250 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 PRKD3O94806 890 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 LGI1O95970 557 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 IFNA14P01570 189 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 IMPDH2P12268 514 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 NCK1P16333 377 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 TNFRSF1BP20333 461 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 CD247P20963 164 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 FKBP2P26885 142 aaKnown RBP9.9□□□□□ -0.82
LIG1-211ENST00000596457 HTR2AP28223 471 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 KDELR2P33947 212 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 GSK3BP49841 420 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 DLX5P56178 289 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 SLC25A3Q00325 362 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 TFF3Q07654 80 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 RASGEF1BQ0VAM2 473 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 CEACAM7Q14002 265 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 VEZF1Q14119 521 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 OR7A5Q15622 319 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 EXOC3L2Q2M3D2 409 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 TMEM201Q5SNT2 666 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 EEF1A1P5Q5VTE0 462 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 CCDC80Q76M96 950 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 RBM45Q8IUH3 476 aaKnown RBP9.9□□□□□ -0.82
LIG1-211ENST00000596457 P3H2Q8IVL5 708 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 TUSC5Q8IXB3 177 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 FITM2Q8N6M3 262 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 RNF148Q8N7C7 305 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 ANKS4BQ8N8V4 417 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 ZNF610Q8N9Z0 462 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 BCAS4Q8TDM0 211 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 ABHD3Q8WU67 409 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 RASSF5Q8WWW0 418 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 PROX1Q92786 737 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 SLC25A36Q96CQ1 311 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 GMPPAQ96IJ6 420 aaPredicted RBP9.9□□□□□ -0.82
LIG1-211ENST00000596457 ARHGDIGQ99819 225 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 KCTD14Q9BQ13 255 aaPredicted RBP9.9□□□□□ -0.82
LIG1-211ENST00000596457 TAPBPLQ9BX59 468 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 TRIM2Q9C040 744 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 PIGMQ9H3S5 423 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 ALG2Q9H553 416 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 NPDC1Q9NQX5 325 aaPredicted RBP9.9□□□□□ -0.82
LIG1-211ENST00000596457 TMEM181Q9P2C4 612 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 KLHL13Q9P2N7 655 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 TESQ9UGI8 421 aaKnown RBP9.9□□□□□ -0.82
LIG1-211ENST00000596457 SH3GLB1Q9Y371 365 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 HDGFL3Q9Y3E1 203 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 PCNX1Q96RV3 2341 aa9.9□□□□□ -0.82
LIG1-211ENST00000596457 A8MVM7 634 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 SYT5O00445 386 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 CXCR6O00574 342 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 SMAD9O15198 467 aaKnown RBP9.89□□□□□ -0.83
LIG1-211ENST00000596457 ZNF208O43345 1280 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 TPST2O60704 377 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 PMS2P2O95744 297 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms