RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ARMC8Q8IUR7 673 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 SLC15A3Q8IY34 581 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 SLC25A43Q8WUT9 341 aaPredicted RBP9.93□□□□□ -0.82
VRK3-210ENST00000596121 SLC35B4Q969S0 331 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 PSD2Q9BQI7 771 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 TIGARQ9NQ88 270 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 PLSCR4Q9NRQ2 329 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 MRGBPQ9NV56 204 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 ANGPT4Q9Y264 503 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 CSMD2Q7Z408 3487 aa9.93□□□□□ -0.82
VRK3-210ENST00000596121 IGKV1D-42A0A075B6H8 117 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 A0A1B0GWA3 101 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 ZNF716A6NP11 495 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 M0R3H8 397 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 CYTIPO60759 359 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 NPIPB7O75200 414 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 LYPD3O95274 346 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 PMS2P2O95744 297 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 LGI1O95970 557 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 THY1P04216 161 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 CCKARP32238 428 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 KCNJ5P48544 419 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 CLK1P49759 484 aaKnown RBP9.92□□□□□ -0.82
VRK3-210ENST00000596121 H3F3AP84243 136 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 EGR4Q05215 589 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 EEF1A1P5Q5VTE0 462 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 CCDC80Q76M96 950 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 CCDC103Q8IW40 242 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 PCYOX1LQ8NBM8 494 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 OR6K3Q8NGY3 331 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 C14orf79Q96F83 325 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 REXO5Q96IC2 774 aaKnown RBP9.92□□□□□ -0.82
VRK3-210ENST00000596121 ZNF300Q96RE9 604 aaPredicted RBP9.92□□□□□ -0.82
VRK3-210ENST00000596121 ZNF607Q96SK3 696 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 ARHGDIGQ99819 225 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 ECSITQ9BQ95 431 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 SPATA5L1Q9BVQ7 753 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 C12orf49Q9H741 205 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 GID8Q9NWU2 228 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 KLHL13Q9P2N7 655 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 PROCRQ9UNN8 238 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 TRAPPC4Q9Y296 219 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 HDGFL3Q9Y3E1 203 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 PRR14LQ5THK1 2151 aa9.92□□□□□ -0.82
VRK3-210ENST00000596121 ABCA4P78363 2273 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 LIPT2A6NK58 231 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 NME4O00746 187 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 SERPINB7O75635 380 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 PLGP00747 810 aaPredicted RBP9.91□□□□□ -0.82
VRK3-210ENST00000596121 YES1P07947 543 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 UQCRBP14927 111 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 TNFRSF1BP20333 461 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 FPR1P21462 350 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 CXCR1P25024 350 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 CPOXP36551 454 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 CD79BP40259 229 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 KIR2DL3P43628 341 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 CPA2P48052 419 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 P2RY4P51582 365 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 CTBP2P56545 445 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 OR2B6P58173 313 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 COPZ1P61923 177 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 TLE4Q04727 773 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 RASGEF1BQ0VAM2 473 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 RNPS1Q15287 305 aaKnown RBP9.91□□□□□ -0.82
VRK3-210ENST00000596121 OR1Q1Q15612 314 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 NRF1Q16656 503 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 ABLIM2Q6H8Q1 611 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.91□□□□□ -0.82
VRK3-210ENST00000596121 P3H2Q8IVL5 708 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 LSMEM1Q8N8F7 131 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 OR52E4Q8NGH9 312 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 OR6T1Q8NGN1 323 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 CCT8L2Q96SF2 557 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 SH3GL1Q99961 368 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 PTDSS2Q9BVG9 487 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 POTEKPQ9BYX7 375 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 NSRP1Q9H0G5 558 aaKnown RBP9.91□□□□□ -0.82
VRK3-210ENST00000596121 ARMC7Q9H6L4 198 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 BCO1Q9HAY6 547 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 CACYBPQ9HB71 228 aaKnown RBP9.91□□□□□ -0.82
VRK3-210ENST00000596121 GLRX2Q9NS18 164 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 ARL8BQ9NVJ2 186 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 TMEM181Q9P2C4 612 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 KCNN3Q9UGI6 736 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 FOXD3Q9UJU5 478 aaPredicted RBP9.91□□□□□ -0.82
VRK3-210ENST00000596121 PRDM4Q9UKN5 801 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 EMC9Q9Y3B6 208 aa9.91□□□□□ -0.82
VRK3-210ENST00000596121 SPIN1Q9Y657 262 aaPredicted RBP9.91□□□□□ -0.82
VRK3-210ENST00000596121 HRNRQ86YZ3 2850 aaPredicted RBP9.91□□□□□ -0.82
VRK3-210ENST00000596121 AKAP6Q13023 2319 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 IGKV3D-15A0A087WSY6 115 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 A0A0B4J2E0 115 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 A0A1B0GX12 115 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 FAM221AA4D161 298 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 PRORSD1PA6NEY8 169 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 A8MVM7 634 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 FAM220BPB1ANY3 271 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 FTCDNL1E5RQL4 147 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 C8BP07358 591 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms