RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 RAB3IPQ96QF0 476 aaPredicted RBP20.26■□□□□ 0.83
SNRNP70-204ENST00000595231 TUBA1CQ9BQE3 449 aa20.26■□□□□ 0.83
SNRNP70-204ENST00000595231 NMNAT1Q9HAN9 279 aaPredicted RBP20.26■□□□□ 0.83
SNRNP70-204ENST00000595231 ALKBH4Q9NXW9 302 aa20.26■□□□□ 0.83
SNRNP70-204ENST00000595231 OSGIN2Q9Y236 505 aa20.26■□□□□ 0.83
SNRNP70-204ENST00000595231 A0A1W2PNR3 127 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 AHRRA9YTQ3 701 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 MT-ND1P03886 318 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 RAP2AP10114 183 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 ST3GAL3Q11203 375 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 EIF2S3LQ2VIR3 472 aaKnown RBP20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 ATCAYQ86WG3 371 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 DDIT4LQ96D03 193 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 MPP4Q96JB8 637 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 OR5B2Q96R09 309 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 FNDC11Q9BVV2 318 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 AURKCQ9UQB9 309 aa20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 FAM32AQ9Y421 112 aaKnown RBP20.25■□□□□ 0.83
SNRNP70-204ENST00000595231 H0Y3Z8 333 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 STSP08842 583 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 TFPIP10646 304 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 SLC7A1P30825 629 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 ACTR3P61158 418 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 MYBPHQ13203 477 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 RTL6Q6ICC9 239 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 C3P1Q6ZMU1 363 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 CYP4Z1Q86W10 505 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 P3H2Q8IVL5 708 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 PAPD5Q8NDF8 572 aaKnown RBP20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 PIK3C3Q8NEB9 887 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 OR10D3Q8NH80 312 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 OR2V1Q8NHB1 315 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 STK35Q8TDR2 534 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 DNAJA3Q96EY1 480 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 ZNF845Q96IR2 970 aaPredicted RBP20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 PIP5K1AQ99755 562 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 POTEKPQ9BYX7 375 aa20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 CCM2LQ9NUG4 571 aaPredicted RBP20.24■□□□□ 0.83
SNRNP70-204ENST00000595231 KDM4EB2RXH2 506 aaPredicted RBP20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 ANKRD65E5RJM6 399 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 WDR1O75083 606 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 PTNP21246 168 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 FOXD4Q12950 439 aaPredicted RBP20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 KPNB1Q14974 876 aaKnown RBP20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 HBMQ6B0K9 141 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 TMPPEQ6ZT21 453 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 OSTF1Q92882 214 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 KTI12Q96EK9 354 aaPredicted RBP20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 DHRS1Q96LJ7 313 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 TMEM43Q9BTV4 400 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 CHID1Q9BWS9 393 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 HDGFL3Q9Y3E1 203 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 FAM215AQ9Y5M1 114 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 KIAA1549Q9HCM3 1950 aa20.23■□□□□ 0.83
SNRNP70-204ENST00000595231 FIGNL2A6NMB9 653 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 IMPDH2P12268 514 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 GABRA1P14867 456 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 ACVR2AP27037 513 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 IFNA8P32881 189 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 CA7P43166 264 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 EIF1AXP47813 144 aaKnown RBP20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 DIO1P49895 249 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 CARD18P57730 90 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 C1orf140Q5VVS0 124 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 PLXDC2Q6UX71 529 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 TMEM255BQ8WV15 326 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 ZNF347Q96SE7 839 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 PTDSS2Q9BVG9 487 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 TP63Q9H3D4 680 aaPredicted RBP20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 DENND2DQ9H6A0 471 aaPredicted RBP20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 CLCA1A8K7I4 914 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 CXCL13O43927 109 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 RPS3AP61247 264 aaKnown RBP20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 TRAM2Q15035 370 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 ACSF3Q4G176 576 aaPredicted RBP20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 RPRMLQ8N4K4 120 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 DUS3LQ96G46 650 aaKnown RBP20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 UCN2Q96RP3 112 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 SRXN1Q9BYN0 137 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 SH3BGRL2Q9UJC5 107 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 TRAPPC4Q9Y296 219 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 TESMINQ9Y4I5 508 aa20.22■□□□□ 0.83
SNRNP70-204ENST00000595231 TRGV8A0A0C4DH27 118 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 A0A1W2PRQ8 180 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 H1F0P07305 194 aaKnown RBP20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 PTGER4P35408 488 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 RAC3P60763 192 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 LSM11P83369 360 aaKnown RBP eCLIP20.21■□□□□ 0.832e-11■■■□□ 18.7
SNRNP70-204ENST00000595231 DGCR6Q14129 220 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 TTC33Q6PID6 262 aaPredicted RBP20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 RPTNQ6XPR3 784 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 PRR7Q8TB68 274 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 SLC7A13Q8TCU3 470 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 TAAR8Q969N4 342 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 RSRC1Q96IZ7 334 aaKnown RBP20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 ANKRD19PQ9H560 264 aa20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 MEPEQ9NQ76 525 aaPredicted RBP20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 PAQR5Q9NXK6 330 aaPredicted RBP20.21■□□□□ 0.83
SNRNP70-204ENST00000595231 SULT2B1O00204 365 aa20.2■□□□□ 0.82
SNRNP70-204ENST00000595231 PMS2P2O95744 297 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms