RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 SLC43A2Q8N370 569 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 LSMEM1Q8N8F7 131 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 GPR32P1Q8NGA4 272 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 TAMM41Q96BW9 452 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 CMTM5Q96DZ9 223 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 GPATCH1Q9BRR8 931 aaKnown RBP12.99□□□□□ -0.33
VRK3-206ENST00000594090 OPN3Q9H1Y3 402 aaPredicted RBP12.99□□□□□ -0.33
VRK3-206ENST00000594090 EFCAB1Q9HAE3 211 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 GP6Q9HCN6 339 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 KLHL28Q9NXS3 571 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 KLHL13Q9P2N7 655 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 TESQ9UGI8 421 aaKnown RBP12.99□□□□□ -0.33
VRK3-206ENST00000594090 PROCRQ9UNN8 238 aa12.99□□□□□ -0.33
VRK3-206ENST00000594090 DNPH1O43598 174 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 CYTIPO60759 359 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 CD247P20963 164 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 PRDX6P30041 224 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 KCNJ5P48544 419 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 NUDT2P50583 147 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 CRYBA2P53672 197 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 C8orf82Q6P1X6 216 aaPredicted RBP12.98□□□□□ -0.33
VRK3-206ENST00000594090 HACD2Q6Y1H2 254 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 CCDC80Q76M96 950 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 KIF18BQ86Y91 864 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 ZHX1-C8orf76Q96EF9 292 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 C14orf79Q96F83 325 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 ARHGDIGQ99819 225 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 PSD2Q9BQI7 771 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 WFDC6Q9BQY6 131 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 EVA1AQ9H8M9 152 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 CMTM6Q9NX76 183 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 TMEM181Q9P2C4 612 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 KLHL9Q9P2J3 617 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 TRAPPC4Q9Y296 219 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 AP3M1Q9Y2T2 418 aa12.98□□□□□ -0.33
VRK3-206ENST00000594090 TMEM229AB2RXF0 380 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 M0R3H8 397 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 LGI1O95970 557 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 C8BP07358 591 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 IMPDH2P12268 514 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 OR2B6P58173 313 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 RASGEF1BQ0VAM2 473 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 BNIP2Q12982 314 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 VEZF1Q14119 521 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 NRF1Q16656 503 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 TMEM201Q5SNT2 666 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 ABLIM2Q6H8Q1 611 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 ZNF474Q6S9Z5 364 aaPredicted RBP12.97□□□□□ -0.33
VRK3-206ENST00000594090 C6orf89Q6UWU4 347 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 TUSC5Q8IXB3 177 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 SLC15A3Q8IY34 581 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 ZNF610Q8N9Z0 462 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 OR2T12Q8NG77 320 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 OR52E4Q8NGH9 312 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 SLC26A7Q8TE54 656 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 HOPXQ9BPY8 73 aaPredicted RBP12.97□□□□□ -0.33
VRK3-206ENST00000594090 ZNF559Q9BR84 538 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 TACO1Q9BSH4 297 aaKnown RBP12.97□□□□□ -0.33
VRK3-206ENST00000594090 TRIM2Q9C040 744 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 BCO1Q9HAY6 547 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 C12orf10Q9HB07 376 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 PLSCR4Q9NRQ2 329 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 RPS6KB2Q9UBS0 482 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 KCNN3Q9UGI6 736 aa12.97□□□□□ -0.33
VRK3-206ENST00000594090 ING1Q9UK53 422 aaPredicted RBP12.97□□□□□ -0.33
VRK3-206ENST00000594090 A0A1B0GWA3 101 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 A8MVM7 634 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 TPST2O60704 377 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 DCTN3O75935 186 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 SSTR2P30874 369 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 IDUAP35475 653 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 KIR2DL3P43628 341 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 PCYT1AP49585 367 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 SLC7A2P52569 658 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 RANBP3LQ86VV4 465 aaPredicted RBP12.96□□□□□ -0.33
VRK3-206ENST00000594090 MICU2Q8IYU8 434 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 DNAJA4Q8WW22 397 aaPredicted RBP12.96□□□□□ -0.33
VRK3-206ENST00000594090 RASSF5Q8WWW0 418 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 LRRC37BQ96QE4 947 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 CCT8L2Q96SF2 557 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 PRR14Q9BWN1 585 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 POTEKPQ9BYX7 375 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 C12orf49Q9H741 205 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 CRIM1Q9NZV1 1036 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 CELSR2Q9HCU4 2923 aa12.96□□□□□ -0.33
VRK3-206ENST00000594090 ELOVL7A1L3X0 281 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 TUBAL3A6NHL2 446 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 LIPT2A6NK58 231 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 ELOA3DA6NLF2 546 aaPredicted RBP12.96□□□□□ -0.34
VRK3-206ENST00000594090 ZNF724A8MTY0 619 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 ZNF814B7Z6K7 855 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 NME4O00746 187 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 SHOX2O60902 331 aaPredicted RBP12.96□□□□□ -0.34
VRK3-206ENST00000594090 NPIPB7O75200 414 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 GPIP06744 558 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 YES1P07947 543 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 FPR1P21462 350 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 CD79BP40259 229 aa12.96□□□□□ -0.34
VRK3-206ENST00000594090 SLC35A1P78382 337 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms