RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 NPIPB7O75200 414 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 PMS2P2O95744 297 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 C8BP07358 591 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 FCGR2AP12318 317 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 PRF1P14222 555 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 UQCRBP14927 111 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 H3F3AP84243 136 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 EGR4Q05215 589 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 NPTX1Q15818 432 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 NRF1Q16656 503 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 INTS11Q5TA45 600 aaKnown RBP13.66□□□□□ -0.22
TRIM47-206ENST00000592942 ERICH5Q6P6B1 374 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 ZNF474Q6S9Z5 364 aaPredicted RBP13.66□□□□□ -0.22
TRIM47-206ENST00000592942 FCRLAQ7L513 359 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 RBM45Q8IUH3 476 aaKnown RBP13.66□□□□□ -0.22
TRIM47-206ENST00000592942 FITM2Q8N6M3 262 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 RNASE6Q93091 150 aaKnown RBP13.66□□□□□ -0.22
TRIM47-206ENST00000592942 DNAJA3Q96EY1 480 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 GMPPAQ96IJ6 420 aaPredicted RBP13.66□□□□□ -0.22
TRIM47-206ENST00000592942 PIGMQ9H3S5 423 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 PLSCR4Q9NRQ2 329 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 PACSIN3Q9UKS6 424 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 TRAPPC4Q9Y296 219 aa13.66□□□□□ -0.22
TRIM47-206ENST00000592942 A0A1B0GWA3 101 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 SULT2B1O00204 365 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 MSTNO14793 375 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 HNRNPRO43390 633 aaKnown RBP13.65□□□□□ -0.22
TRIM47-206ENST00000592942 CYTIPO60759 359 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 PRKD3O94806 890 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 FESP07332 822 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 TFPIP10646 304 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 CXCR1P25024 350 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 CPA2P48052 419 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 NUDT2P50583 147 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 SLC7A2P52569 658 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 COPZ1P61923 177 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 SIRPAP78324 504 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 LIPEQ05469 1076 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 SNTB1Q13884 538 aaKnown RBP13.65□□□□□ -0.22
TRIM47-206ENST00000592942 PPP4R4Q6NUP7 873 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 C6orf89Q6UWU4 347 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 MEX3BQ6ZN04 569 aaKnown RBP13.65□□□□□ -0.22
TRIM47-206ENST00000592942 TRPM8Q7Z2W7 1104 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 LUZP2Q86TE4 346 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 TSPYL5Q86VY4 417 aaPredicted RBP13.65□□□□□ -0.22
TRIM47-206ENST00000592942 MICU2Q8IYU8 434 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 CNEP1R1Q8N9A8 125 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 ZNF610Q8N9Z0 462 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 OR2T12Q8NG77 320 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 OR6T1Q8NGN1 323 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 MARVELD3Q96A59 401 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 POTEKPQ9BYX7 375 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 OPN3Q9H1Y3 402 aaPredicted RBP13.65□□□□□ -0.22
TRIM47-206ENST00000592942 GLRX2Q9NS18 164 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 TMEM181Q9P2C4 612 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 ABCD2Q9UBJ2 740 aa13.65□□□□□ -0.22
TRIM47-206ENST00000592942 SPIN1Q9Y657 262 aaPredicted RBP13.65□□□□□ -0.22
TRIM47-206ENST00000592942 TEP1Q99973 2627 aaKnown RBP13.65□□□□□ -0.22
TRIM47-206ENST00000592942 ELOVL7A1L3X0 281 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 EEF1E1-BLOC1S5C9J1V9 151 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 M0R3H8 397 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 EEF1E1O43324 174 aaKnown RBP13.64□□□□□ -0.23
TRIM47-206ENST00000592942 RAMP1O60894 148 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 LYPD3O95274 346 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 THY1P04216 161 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 CD8BP10966 210 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 AGTR1P30556 359 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 KDELR2P33947 212 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 NTF4P34130 210 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 PSME3P61289 254 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 OR1Q1Q15612 314 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 GTF2IRD2BQ6EKJ0 949 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 NUFIP2Q7Z417 695 aaKnown RBP13.64□□□□□ -0.23
TRIM47-206ENST00000592942 ARPINQ7Z6K5 226 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 GTF2IRD2Q86UP8 949 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 TUSC5Q8IXB3 177 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 SLC43A2Q8N370 569 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 OR52E4Q8NGH9 312 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 SLC38A4Q969I6 547 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 DDIT4LQ96D03 193 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 PSD2Q9BQI7 771 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 ZNF559Q9BR84 538 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 TRIM2Q9C040 744 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 EVA1AQ9H8M9 152 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 BCO1Q9HAY6 547 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 C12orf10Q9HB07 376 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 GP6Q9HCN6 339 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
TRIM47-206ENST00000592942 MPDZO75970 2070 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 IGKV1D-42A0A075B6H8 117 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 A0A0B4J2E0 115 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 A0A1B0GX12 115 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 LIPT2A6NK58 231 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 ENO4A6NNW6 628 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 ZNF716A6NP11 495 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 A8MVM7 634 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 COX6B1P14854 86 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 FPR1P21462 350 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 UQCRC1P31930 480 aa13.63□□□□□ -0.23
TRIM47-206ENST00000592942 GSK3BP49841 420 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms