RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 SYPL1Q16563 259 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 NRF1Q16656 503 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 GSTA3Q16772 222 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 ZSWIM7Q19AV6 140 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 PGGHGQ32M88 737 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 PDCD4Q53EL6 469 aaKnown RBP11.71□□□□□ -0.53
APOC1-209ENST00000592885 ATG16L1Q676U5 607 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 OR7E24Q6IFN5 339 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 KLHL17Q6TDP4 642 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 TMEM108Q6UXF1 575 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 MSANTD1Q6ZTZ1 278 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 PEX5LQ8IYB4 626 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 UBE2J2Q8N2K1 259 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 C17orf78Q8N4C9 275 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 ANKFN1Q8N957 763 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 C1orf162Q8NEQ5 155 aaPredicted RBP11.71□□□□□ -0.53
APOC1-209ENST00000592885 CNOT9Q92600 299 aaKnown RBP11.71□□□□□ -0.53
APOC1-209ENST00000592885 ZG16BQ96DA0 208 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 PAIP2Q9BPZ3 127 aaKnown RBP11.71□□□□□ -0.53
APOC1-209ENST00000592885 NAA11Q9BSU3 229 aaPredicted RBP11.71□□□□□ -0.53
APOC1-209ENST00000592885 PIF1Q9H611 641 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 PARPBPQ9NWS1 579 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 THUMPD1Q9NXG2 353 aaKnown RBP11.71□□□□□ -0.53
APOC1-209ENST00000592885 CISD1Q9NZ45 108 aaKnown RBP11.71□□□□□ -0.53
APOC1-209ENST00000592885 NPAP1Q9NZP6 1156 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 P2RX2Q9UBL9 471 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 DCTN4Q9UJW0 460 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 OSGIN1Q9UJX0 560 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 TMED7Q9Y3B3 224 aa11.71□□□□□ -0.53
APOC1-209ENST00000592885 DSPPQ9NZW4 1301 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 CIB4A0PJX0 185 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 TMEM120BA0PK00 339 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 CFAP73A6NFT4 308 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 CLDN24A6NM45 220 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 C9JVG2 144 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 AP3D1O14617 1153 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 ABCD4O14678 606 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 ADAM11O75078 769 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 RAD51DO75771 328 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 ZCCHC18P0CG32 403 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 NR2F1P10589 423 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 IL7RP16871 459 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 EPHA3P29320 983 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 IL12AP29459 219 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 NME5P56597 212 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 OR2B6P58173 313 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 EPS8Q12929 822 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 TNK1Q13470 666 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 LIN52Q52LA3 116 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 MRPL2Q5T653 305 aaKnown RBP11.7□□□□□ -0.54
APOC1-209ENST00000592885 AGAP6Q5VW22 663 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 PAQR6Q6TCH4 344 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 ZNF621Q6ZSS3 439 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.7□□□□□ -0.54
APOC1-209ENST00000592885 ATG4DQ86TL0 474 aaPredicted RBP11.7□□□□□ -0.54
APOC1-209ENST00000592885 ANKRD42Q8N9B4 389 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 NEUROG1Q92886 237 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 ZNF775Q96BV0 537 aaPredicted RBP11.7□□□□□ -0.54
APOC1-209ENST00000592885 MAELQ96JY0 434 aaKnown RBP11.7□□□□□ -0.54
APOC1-209ENST00000592885 INPP5KQ9BT40 448 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 AMBRA1Q9C0C7 1298 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 OR11A1Q9GZK7 315 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 SLCO5A1Q9H2Y9 848 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 ZIM2Q9NZV7 527 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 FLVCR1Q9Y5Y0 555 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 TLN2Q9Y4G6 2542 aa11.7□□□□□ -0.54
APOC1-209ENST00000592885 TMEM72A0PK05 275 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 CDHR4A6H8M9 788 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 CCT8L1PA6NM43 557 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 PDLIM1O00151 329 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 RFXANKO14593 260 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 PCSK6P29122 969 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 TACR3P29371 465 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 CDKN1AP38936 164 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 CDKN2CP42773 168 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 CRISP3P54108 245 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 TGFBR3Q03167 851 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 DMTNQ08495 405 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 RNF220Q5VTB9 566 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 CASP12Q6UXS9 341 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 DNM1P46Q6ZS02 220 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 HS6ST2Q96MM7 605 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 MUS81Q96NY9 551 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 SF3B5Q9BWJ5 86 aaKnown RBP11.69□□□□□ -0.54
APOC1-209ENST00000592885 ADAM19Q9H013 955 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 WDR55Q9H6Y2 383 aaPredicted RBP11.69□□□□□ -0.54
APOC1-209ENST00000592885 RMND5AQ9H871 391 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 CACYBPQ9HB71 228 aaKnown RBP11.69□□□□□ -0.54
APOC1-209ENST00000592885 AMDHD2Q9Y303 409 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 SLC25A15Q9Y619 301 aa11.69□□□□□ -0.54
APOC1-209ENST00000592885 CADP27708 2225 aa11.68□□□□□ -0.54
APOC1-209ENST00000592885 A0A096LPI6 279 aa11.68□□□□□ -0.54
APOC1-209ENST00000592885 INAFM1C9JVW0 142 aa11.68□□□□□ -0.54
APOC1-209ENST00000592885 RAMP1O60894 148 aa11.68□□□□□ -0.54
APOC1-209ENST00000592885 SLC22A3O75751 556 aa11.68□□□□□ -0.54
APOC1-209ENST00000592885 CD8AP01732 235 aa11.68□□□□□ -0.54
APOC1-209ENST00000592885 IGHV3-9P01782 118 aa11.68□□□□□ -0.54
APOC1-209ENST00000592885 IGHV4-39P01824 125 aa11.68□□□□□ -0.54
APOC1-209ENST00000592885 GPIP06744 558 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms