RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 MELKQ14680 651 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 EEF1A1P5Q5VTE0 462 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 BTN2A1Q7KYR7 527 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 MAMDC2Q7Z304 686 aaPredicted RBP13.46□□□□□ -0.26
RETREG3-208ENST00000589797 S100A16Q96FQ6 103 aaKnown RBP13.46□□□□□ -0.26
RETREG3-208ENST00000589797 GAREM1Q9H706 876 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 CLEC1BQ9P126 229 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF639Q9UID6 485 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 TLCD2A6NGC4 264 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 SRFP11831 508 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 FCARP24071 287 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 PSMA3P25788 255 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 TAS2R43P59537 309 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 C4orf46Q504U0 113 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF322Q6U7Q0 402 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 PAQR5Q9NXK6 330 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 UTS2O95399 124 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 MRPL19P49406 292 aaKnown RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ACTC1P68032 377 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ACTA1P68133 377 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ARFRP1Q13795 201 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 C14orf28Q4W4Y0 310 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 DMRTC1Q5HYR2 192 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 KIAA0907Q7Z7F0 614 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 CCDC71Q8IV32 467 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ZBTB8BQ8NAP8 495 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ULBP3Q9BZM4 244 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 OR11A1Q9GZK7 315 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 M0R082 166 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 PDCD5O14737 125 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 H2BFMP0C1H6 154 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 SRYQ05066 204 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 VASNQ6EMK4 673 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 TEAD3Q99594 435 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 PELOQ9BRX2 385 aaKnown RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 CACNG6Q9BXT2 260 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 DUSP22Q9NRW4 184 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 EPHA6Q9UF33 1036 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 BOLA1Q9Y3E2 137 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 SELENOFO60613 162 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 GCM2O75603 506 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF20P17024 532 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 S1PR1P21453 382 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 FPR3P25089 353 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 GLYR1Q49A26 553 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 TMEM69Q5SWH9 247 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 LIN54Q6MZP7 749 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF782Q6ZMW2 699 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 MCEMP1Q8IX19 187 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 RBM12BQ8IXT5 1001 aaKnown RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 IL22RA1Q8N6P7 574 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 WDR34Q96EX3 536 aa13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ISG20L2Q9H9L3 353 aaKnown RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 TESQ9UGI8 421 aaKnown RBP13.45□□□□□ -0.26
RETREG3-208ENST00000589797 ANKRD36A6QL64 1941 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 PEBP1P30086 187 aaKnown RBP13.44□□□□□ -0.26
RETREG3-208ENST00000589797 POU3F1Q03052 451 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-208ENST00000589797 NTRK2Q16620 822 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 BCL2L15Q5TBC7 163 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 PAPD4Q6PIY7 484 aaKnown RBP13.44□□□□□ -0.26
RETREG3-208ENST00000589797 PAMR1Q6UXH9 720 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF283Q8N7M2 679 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 TMEM41AQ96HV5 264 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 MED11Q9P086 117 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 KLK4Q9Y5K2 254 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 CENPVL1A0A0U1RR11 272 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 CXorf51AA0A1B0GTR3 108 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 CHRNB1P11230 501 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 IL7P13232 177 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 CLRN1P58418 232 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 KLHL26Q53HC5 615 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 ZMAT1Q5H9K5 638 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF620Q6ZNG0 422 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 ZAR1Q86SH2 424 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 MS4A15Q8N5U1 240 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 TM9SF4Q92544 642 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 PITX2Q99697 317 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 EMC6Q9BV81 110 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 C19orf25Q9UFG5 118 aaPredicted RBP13.44□□□□□ -0.26
RETREG3-208ENST00000589797 METTL15A6NJ78 407 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 CTSBP07858 339 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 HCKP08631 526 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 ITGA5P08648 1049 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 HIST1H1CP16403 213 aaKnown RBP13.44□□□□□ -0.26
RETREG3-208ENST00000589797 TSFMP43897 325 aaKnown RBP13.44□□□□□ -0.26
RETREG3-208ENST00000589797 ARHGAP11BQ3KRB8 267 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 TMEM164Q5U3C3 297 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 ZNF613Q6PF04 617 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 PPP1R3BQ86XI6 285 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 TMEM52Q8NDY8 209 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 DYNC2LI1Q8TCX1 351 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 FAM46BQ96A09 425 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 OR14A2Q96R54 314 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 GABARAPL1Q9H0R8 117 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 ATG5Q9H1Y0 275 aa13.44□□□□□ -0.26
RETREG3-208ENST00000589797 A6NL46 340 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 LSSP48449 732 aa13.43□□□□□ -0.26
RETREG3-208ENST00000589797 PCBP3P57721 371 aaKnown RBP13.43□□□□□ -0.26
RETREG3-208ENST00000589797 ACY1Q03154 408 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms