RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 FAM98AQ8NCA5 519 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ELOA3Q8NG57 546 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 OR6C4Q8NGE1 309 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 OR13C2Q8NGS9 318 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 OR9A4Q8NGU2 314 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 OR2T27Q8NH04 317 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 UBASH3BQ8TF42 649 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CAPSLQ8WWF8 208 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PATE1Q8WXA2 126 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CNOT9Q92600 299 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PTP4A1Q93096 173 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ZC3HAV1LQ96H79 300 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 C1orf159Q96HA4 380 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ART5Q96L15 291 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CCDC74BQ96LY2 380 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 NEDD4LQ96PU5 975 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SOSTQ9BQB4 213 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TTYH2Q9BSA4 534 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 C11orf54Q9H0W9 315 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ISG20L2Q9H9L3 353 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 FOLH1BQ9HBA9 442 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 USP36Q9P275 1121 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PRODH2Q9UF12 536 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CGGBP1Q9UFW8 167 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CD207Q9UJ71 328 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 KCNE5Q9UJ90 142 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 POU2F3Q9UKI9 436 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 MRPS2Q9Y399 296 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 EMC9Q9Y3B6 208 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 NPIPA5A0A0B4J1W7 369 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CENPVL1A0A0U1RR11 272 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 C2orf92A0A1B0GVN3 265 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SMIM30A4D0T7 59 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SYNDIG1LA6NDD5 238 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 VSTM5A8MXK1 200 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 NPIPA7E9PJI5 369 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 J3QLW9 94 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 LYRM1O43325 122 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 REM1O75628 298 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 NTN1O95631 604 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CBX7O95931 251 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CT62P0C5K7 136 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 NPIPA8P0DM63 369 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PSKH1P11801 424 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF19P17023 458 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TYRP1P17643 537 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 APEX1P27695 318 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 RPL4P36578 427 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 LSSP48449 732 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CAV3P56539 151 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 NRG3P56975 720 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PRPS1P60891 318 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PITPNAQ00169 270 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PSG6Q00889 435 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CSTF1Q05048 431 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CRYZQ08257 329 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SERTAD2Q14140 314 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ELOCQ15369 112 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF141Q15928 474 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TBRG1Q3YBR2 411 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF57Q68EA5 555 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ARL9Q6T311 187 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 WDR88Q6ZMY6 472 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TMEM91Q6ZNR0 172 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CEACAM19Q7Z692 300 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 CADM2Q8N3J6 435 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TEX19Q8NA77 164 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TMEM52Q8NDY8 209 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 DUSP18Q8NEJ0 188 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 OR5M3Q8NGP4 307 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SMPDL3BQ92485 455 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TTC9Q92623 222 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SGTBQ96EQ0 304 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ERMAPQ96PL5 475 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TNFRSF13CQ96RJ3 184 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 UBL7Q96S82 380 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TBX5Q99593 518 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF426Q9BUY5 554 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SLC19A3Q9BZV2 496 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 HDHD2Q9H0R4 259 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 MED20Q9H944 212 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 RPRD1BQ9NQG5 326 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SLC2A4RGQ9NR83 387 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PRTFDC1Q9NRG1 225 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 FBXO34Q9NWN3 711 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SCN3AQ9NY46 2000 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 RABL2AQ9UBK7 228 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 SERTAD3Q9UJW9 196 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 MRTO4Q9UKD2 239 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 NDRG2Q9UN36 371 aaKnown RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 RABL2BQ9UNT1 228 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 NPFFR2Q9Y5X5 522 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 TRANK1O15050 2925 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 TRAV27A0A087WT01 109 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 B4DXG7 233 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 TMEM127O75204 238 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 LYPD3O95274 346 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 NSA2O95478 260 aaKnown RBP6.8□□□□□ -1.32
ZNF540-206ENST00000589117 CSTAP01040 98 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 IGLV3-19P01714 112 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms