RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 ZNF264O43296 627 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 RIPK2O43353 540 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 PFKFB2O60825 505 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 RFC4P35249 363 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 PTGDSP41222 190 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 MAP3K8P41279 467 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 SSR1P43307 286 aaKnown RBP2.44□□□□□ -2.02
SMAD4-207ENST00000589076 CASP4P49662 377 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 AIF1P55008 147 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 STX17P56962 302 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 LYZP61626 148 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 ORC2Q13416 577 aaPredicted RBP2.44□□□□□ -2.02
SMAD4-207ENST00000589076 KLF17Q5JT82 389 aaPredicted RBP2.44□□□□□ -2.02
SMAD4-207ENST00000589076 C1orf220Q5T0J3 134 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 OR4F3Q6IEY1 312 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 C11orf71Q6IPW1 123 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 ZSCAN25Q6NSZ9 544 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 PMF1Q6P1K2 205 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 UNQ9370/PRO34162Q6UXP9 181 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 SCARA5Q6ZMJ2 495 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 FAM43BQ6ZT52 329 aaPredicted RBP2.44□□□□□ -2.02
SMAD4-207ENST00000589076 CCDC65Q8IXS2 484 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 SLC35F2Q8IXU6 374 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 ZNF679Q8IYX0 411 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 CATSPER1Q8NEC5 780 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 TRPV1Q8NER1 839 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 ZNF564Q8TBZ8 553 aaPredicted RBP2.44□□□□□ -2.02
SMAD4-207ENST00000589076 DNAJA4Q8WW22 397 aaPredicted RBP2.44□□□□□ -2.02
SMAD4-207ENST00000589076 OR1E3Q8WZA6 343 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 ST8SIA1Q92185 356 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 RAPGEF5Q92565 580 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 LINC00167Q96N53 147 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 KLHDC3Q9BQ90 382 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 CAPS2Q9BXY5 557 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 PARD6BQ9BYG5 372 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 SELENOIQ9C0D9 397 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 ADAM22Q9P0K1 906 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 COX16Q9P0S2 106 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 BTNL2Q9UIR0 455 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 CDH9Q9ULB4 789 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 ABCG2Q9UNQ0 655 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 COPS3Q9UNS2 423 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 IFT52Q9Y366 437 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 TIMM10BQ9Y5J6 103 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 KANK1Q14678 1352 aa2.44□□□□□ -2.02
SMAD4-207ENST00000589076 TTC21BQ7Z4L5 1316 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 SH3TC1Q8TE82 1336 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 SYNJ2BP-COX16A0A087WUM0 186 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 A0A1B0GUS0 222 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 ZNF208O43345 1280 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 SURF6O75683 361 aaKnown RBP2.43□□□□□ -2.02
SMAD4-207ENST00000589076 TIMP1P01033 207 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 POU2F1P14859 743 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 GNA11P29992 359 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 CALCRP30988 508 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 CCT3P49368 545 aaKnown RBP2.43□□□□□ -2.02
SMAD4-207ENST00000589076 BIDP55957 195 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 UBE2HP62256 183 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 RPS14P62263 151 aaKnown RBP2.43□□□□□ -2.02
SMAD4-207ENST00000589076 GTF3C1Q12789 2109 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 ASPHQ12797 758 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 CAPRIN1Q14444 709 aaKnown RBP2.43□□□□□ -2.02
SMAD4-207ENST00000589076 CEP55Q53EZ4 464 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 OTPQ5XKR4 325 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 ZNF544Q6NX49 715 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 EFL1Q7Z2Z2 1120 aaKnown RBP2.43□□□□□ -2.02
SMAD4-207ENST00000589076 VRK2Q86Y07 508 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 LRRC75A-AS1Q8N1F1 130 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 OR2L13Q8N349 312 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 ALLCQ8N6M5 410 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 CCDC71LQ8N9Z2 235 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 BHLHE23Q8NDY6 225 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 OR2L5Q8NG80 312 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 OR5D13Q8NGL4 314 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 LINC01006Q8NI28 216 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 ZNF606Q8WXB4 792 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 UBE2E3Q969T4 207 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 RPRD1AQ96P16 312 aaPredicted RBP2.43□□□□□ -2.02
SMAD4-207ENST00000589076 TECTBQ96PL2 329 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 NPAS2Q99743 824 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 ARHGDIGQ99819 225 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 EBF4Q9BQW3 602 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 MAGT1Q9H0U3 335 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 REEP4Q9H6H4 257 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 NHEJ1Q9H9Q4 299 aaPredicted RBP2.43□□□□□ -2.02
SMAD4-207ENST00000589076 FOLH1BQ9HBA9 442 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 SH2D2AQ9NP31 389 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 CLEC4AQ9UMR7 237 aa2.43□□□□□ -2.02
SMAD4-207ENST00000589076 TDRD6O60522 2096 aaKnown RBP2.43□□□□□ -2.02
SMAD4-207ENST00000589076 PLEKHH1Q9ULM0 1364 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 A0A0G2JRQ6 117 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 VSTM2BA6NLU5 285 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 HIP1O00291 1037 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 DCTN6O00399 190 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 HCRTR1O43613 425 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 PRKAB2O43741 272 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 UGT1A9O60656 530 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 MMP23AO75900 390 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 ATP5LO75964 103 aa2.42□□□□□ -2.02
SMAD4-207ENST00000589076 IL1BP01584 269 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms