RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 WIF1Q9Y5W5 379 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 SPIN1Q9Y657 262 aaPredicted RBP11.48□□□□□ -0.57
VMP1-202ENST00000585847 HEATR5AQ86XA9 2040 aa11.48□□□□□ -0.57
VMP1-202ENST00000585847 TRAV17A0A0B4J275 112 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 ELOA3DA6NLF2 546 aaPredicted RBP11.47□□□□□ -0.57
VMP1-202ENST00000585847 CLDN24A6NM45 220 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 SNTNA6NMZ2 147 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 G3V3Y1 287 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 KLF4O43474 513 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 FRS3O43559 492 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 WISP2O76076 250 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 RCBTB2O95199 551 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 CCDC159P0C7I6 412 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 GP1BBP13224 206 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 CNR1P21554 472 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 ADH6P28332 368 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 GSSP48637 474 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 DNASE1L1P49184 302 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 GPR85P60893 370 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 ZNF117Q03924 483 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 PRKCDQ05655 676 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 FOXO1Q12778 655 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 MFSD13AQ14CX5 517 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 CD226Q15762 336 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.47□□□□□ -0.572e-7■■■■■ 32.6
VMP1-202ENST00000585847 ELOA3BQ3SY89 546 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 RBM48Q5RL73 367 aaKnown RBP11.47□□□□□ -0.57
VMP1-202ENST00000585847 ZNF691Q5VV52 312 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 SLC22A10Q63ZE4 541 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 LINC00114Q6XXX2 140 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 ELOA3Q8NG57 546 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 OR9Q2Q8NGE9 314 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 TEX47Q8TBZ9 253 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 LIPHQ8WWY8 451 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 PNPLA2Q96AD5 504 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 C3orf49Q96BT1 292 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 TAAR6Q96RI8 345 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 MBOAT4Q96T53 435 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 KLHDC3Q9BQ90 382 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 ANGPTL4Q9BY76 406 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 RIBC2Q9H4K1 309 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 GALNT9Q9HCQ5 603 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 BATF3Q9NR55 127 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 SACM1LQ9NTJ5 587 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 MED17Q9NVC6 651 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 PPP4R1LQ9P1A2 415 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 RHCGQ9UBD6 479 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 SCOCQ9UIL1 159 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 B3GNT3Q9Y2A9 372 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 MYRFQ9Y2G1 1151 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 CDH10Q9Y6N8 788 aa11.47□□□□□ -0.57
VMP1-202ENST00000585847 SPENQ96T58 3664 aaKnown RBP11.47□□□□□ -0.57
VMP1-202ENST00000585847 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 LRRC3CA6NJW4 275 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 HCN1O60741 890 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 TRIM3O75382 744 aaPredicted RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 MT-ATP6P00846 226 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 GKN3PP0CG01 181 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 PRG2P13727 222 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 CD46P15529 392 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 PRKACGP22612 351 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 GGT2P36268 569 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 APOBEC1P41238 236 aaKnown RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 OMPP47874 163 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 CLK1P49759 484 aaKnown RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 ZNF41P51814 821 aaPredicted RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 POLR2HP52434 150 aaKnown RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 SMSP52788 366 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 CRISP1P54107 249 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 GABARAPL2P60520 117 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 PMP22Q01453 160 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 SEC23BQ15437 767 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 SLC25A53Q5H9E4 307 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 RNFT1Q5M7Z0 435 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 RPUSD3Q6P087 351 aaKnown RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 UGT2A3Q6UWM9 527 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 ZER1Q7Z7L7 766 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 ATG4DQ86TL0 474 aaPredicted RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 HS3ST5Q8IZT8 346 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 OR2M7Q8NG81 312 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 OR52L1Q8NGH7 329 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 ZNF563Q8TA94 476 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 STK35Q8TDR2 534 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 FBLIM1Q8WUP2 373 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 SLC25A43Q8WUT9 341 aaPredicted RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 HDAC2Q92769 488 aaKnown RBP11.46□□□□□ -0.57
VMP1-202ENST00000585847 ZNF566Q969W8 418 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 ZBTB8AQ96BR9 441 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 TMEM41AQ96HV5 264 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 MRGPRX4Q96LA9 322 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 CNBD2Q96M20 576 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 Q96MT0 163 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 SLC38A2Q96QD8 506 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 PRSS27Q9BQR3 290 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 ADAM19Q9H013 955 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 SLC25A19Q9HC21 320 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 CCNB1IP1Q9NPC3 277 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 TIMMDC1Q9NPL8 285 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 IMPAD1Q9NX62 359 aa11.46□□□□□ -0.57
VMP1-202ENST00000585847 TUBA8Q9NY65 449 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms