RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	KLHL17	Q6TDP4	642 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	B3GLCT	Q6Y288	498 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	MUC15	Q8N387	334 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	VPS37A	Q8NEZ2	397 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	OR52E4	Q8NGH9	312 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TESC	Q96BS2	214 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	REPIN1	Q9BWE0	567 aa	Known RBP	14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	EXOSC3	Q9NQT5	275 aa	Known RBP	14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TMEM181	Q9P2C4	612 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	MALT1	Q9UDY8	824 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	POU2F3	Q9UKI9	436 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TMED7-TICAM2	A0A0A6YYA0	188 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ELOA3D	A6NLF2	546 aa	Predicted RBP	14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	RNF212B	A8MTL3	300 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460		M0R1B8	84 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	HMGN4	O00479	90 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	AP3D1	O14617	1153 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	IFNA2	P01563	188 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SERPINE1	P05121	402 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	MYZAP	P0CAP1	466 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	IMPDH2	P12268	514 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	MAGEA8	P43361	318 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	DSCR9	P59020	149 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CHI3L2	Q15782	390 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ELOA3B	Q3SY89	546 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	GPAT3	Q53EU6	434 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SPANXN4	Q5MJ08	99 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	FBXL14	Q8N1E6	418 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ANKFN1	Q8N957	763 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ELOA3	Q8NG57	546 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TNFRSF13C	Q96RJ3	184 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TMEM109	Q9BVC6	243 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SLC7A10	Q9NS82	523 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	MARCO	Q9UEW3	520 aa	Predicted RBP	14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	OSGIN1	Q9UJX0	560 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TMED7	Q9Y3B3	224 aa		14.36	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TMEM72	A0PK05	275 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CHI3L1	P36222	383 aa	Predicted RBP	14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	HTR3A	P46098	478 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	RPL14	P50914	215 aa	Known RBP	14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SLC35A1	P78382	337 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	LOXL1	Q08397	574 aa	Predicted RBP	14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SLC17A1	Q14916	467 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SYPL1	Q16563	259 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TMEM249	Q2WGJ8	235 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CHRFAM7A	Q494W8	412 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	C9orf135	Q5VTT2	229 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CLEC2A	Q6UVW9	174 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	DEPDC4	Q8N2C3	294 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	PMM1	Q92871	262 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TEX37	Q96LM6	180 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TRNT1	Q96Q11	434 aa	Known RBP	14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SORT1	Q99523	831 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SLC35A5	Q9BS91	424 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	INPP5K	Q9BT40	448 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	AMBRA1	Q9C0C7	1298 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SLC38A1	Q9H2H9	487 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	PARPBP	Q9NWS1	579 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	RAP2C	Q9Y3L5	183 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	FLVCR1	Q9Y5Y0	555 aa		14.35	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ZC3H12D	A2A288	527 aa	Known RBP	14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	AGAP5	A6NIR3	686 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	BIRC5	O15392	142 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ZNF208	O43345	1280 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	EIF1B	O60739	113 aa	Known RBP	14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CHRM4	P08173	479 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	LBP	P18428	481 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TACR3	P29371	465 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	S100A3	P33764	101 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	KHK	P50053	298 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	POLR2H	P52434	150 aa	Known RBP	14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	C6orf52	Q5T4I8	152 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TSPO2	Q5TGU0	170 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ZNF544	Q6NX49	715 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CASP12	Q6UXS9	341 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	RNF130	Q86XS8	419 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	PHC2	Q8IXK0	858 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ZNF525	Q8N782	197 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ZIC4	Q8N9L1	334 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	AEN	Q8WTP8	325 aa	Known RBP	14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	NANOS1	Q8WY41	292 aa	Known RBP	14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CCDC115	Q96NT0	180 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	NAA11	Q9BSU3	229 aa	Predicted RBP	14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ADAM19	Q9H013	955 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	MTHFD2L	Q9H903	347 aa	Predicted RBP	14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SLC17A5	Q9NRA2	495 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	UPB1	Q9UBR1	384 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	BTNL2	Q9UIR0	455 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	DCTN4	Q9UJW0	460 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ATP23	Q9Y6H3	246 aa		14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CHD3	Q12873	2000 aa	Known RBP	14.34	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CCDC154	A6NI56	674 aa		14.33	□□□□□ -0.12
PRKAR1A-206	ENST00000585460		H7C417	338 aa		14.33	□□□□□ -0.12
PRKAR1A-206	ENST00000585460	SLC1A3	P43003	542 aa		14.33	□□□□□ -0.12
PRKAR1A-206	ENST00000585460	SLC1A6	P48664	564 aa		14.33	□□□□□ -0.12
PRKAR1A-206	ENST00000585460	CLNS1A	P54105	237 aa	Known RBP	14.33	□□□□□ -0.12
PRKAR1A-206	ENST00000585460	NME5	P56597	212 aa		14.33	□□□□□ -0.12
PRKAR1A-206	ENST00000585460	UFM1	P61960	85 aa		14.33	□□□□□ -0.12
PRKAR1A-206	ENST00000585460	VLDLR	P98155	873 aa		14.33	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms