RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 PRRG4Q9BZD6 226 aa13.12□□□□□ -0.31
SCAMP4-209ENST00000585335 YY1AP1Q9H869 796 aa13.12□□□□□ -0.31
SCAMP4-209ENST00000585335 CALHM2Q9HA72 323 aa13.12□□□□□ -0.31
SCAMP4-209ENST00000585335 IL1RAPQ9NPH3 570 aa13.12□□□□□ -0.31
SCAMP4-209ENST00000585335 ZNF175Q9Y473 711 aa13.12□□□□□ -0.31
SCAMP4-209ENST00000585335 A0A0J9YW62 118 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 TCRBV5S2A0A599 114 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 DHRS12A0PJE2 317 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 CD8B2A6NJW9 211 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 CLCA1A8K7I4 914 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 hCG_2039718K7EN88 272 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 SULT2B1O00204 365 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 CCL21O00585 134 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 DNPH1O43598 174 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 PMS2P2O95744 297 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 GTF2E2P29084 291 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 RBM34P42696 430 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 YAP1P46937 504 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 SUCLG1P53597 346 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 PER3P56645 1201 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 MYBPHQ13203 477 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 PIN1Q13526 163 aaPredicted RBP13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 TRAM2Q15035 370 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 C4orf17Q53FE4 359 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 EMC4Q5J8M3 183 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 C1orf140Q5VVS0 124 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 NSUN5P2Q63ZY6 315 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 GDF7Q7Z4P5 450 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 ZGRF1Q86YA3 2104 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 OFCC1Q8IZS5 231 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 OSTF1Q92882 214 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 HS6ST2Q96MM7 605 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 ZNF300Q96RE9 604 aaPredicted RBP13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 PIP5K1AQ99755 562 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 TM9SF2Q99805 663 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 SLC19A3Q9BZV2 496 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 OR11A1Q9GZK7 315 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 ANKRD19PQ9H560 264 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 NDUFAF4Q9P032 175 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 A4GNTQ9UNA3 340 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 AURKCQ9UQB9 309 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 TRAPPC4Q9Y296 219 aa13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 PRRC2CQ9Y520 2896 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-209ENST00000585335 TRAV36DV7A0A075B6V5 113 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 A0A1W2PNR3 127 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 SLC22A20A6NK97 555 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 H0YC42 278 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 OR2T1O43869 369 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 CXCL13O43927 109 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 WISP1O95388 367 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 SEMG1P04279 462 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 RAP2AP10114 183 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 SHC1P29353 583 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 DIO1P49895 249 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 TPD52P55327 224 aaPredicted RBP13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 OR2B6P58173 313 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 RAC3P60763 192 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 SLC35A1P78382 337 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 VLDLRP98155 873 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 CTU2Q2VPK5 515 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 RPTNQ6XPR3 784 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 C3P1Q6ZMU1 363 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 TMPPEQ6ZT21 453 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 C10orf67Q8IYJ2 551 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 WNT2BQ93097 391 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 RELTQ969Z4 430 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 ADGRG7Q96K78 797 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 C7orf34Q96L11 122 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 KLHL4Q9C0H6 718 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 MEMO1Q9Y316 297 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 BAHCC1Q9P281 2608 aa13.1□□□□□ -0.31
SCAMP4-209ENST00000585335 GTF3C1Q12789 2109 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 TCRBV3S1A0A5B6 114 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 J3KTA2 159 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 EIF1BO60739 113 aaKnown RBP13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 IL2RAP01589 272 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 H1F0P07305 194 aaKnown RBP13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 ENPP1P22413 925 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 SPIBQ01892 262 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 MFSD13AQ14CX5 517 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 PON3Q15166 354 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 GTF2IRD2BQ6EKJ0 949 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 OR2A2Q6IF42 318 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 RRM2BQ7LG56 351 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 PIWIL3Q7Z3Z3 882 aaKnown RBP13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 GTF2IRD2Q86UP8 949 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 FJX1Q86VR8 437 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 MCEMP1Q8IX19 187 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 C10orf53Q8N6V4 93 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 PIK3C3Q8NEB9 887 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 ARL5BQ96KC2 179 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 UCN2Q96RP3 112 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 NAA11Q9BSU3 229 aaPredicted RBP13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 COQ10BQ9H8M1 238 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 KRCC1Q9NPI7 259 aaPredicted RBP13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 C6orf203Q9P0P8 240 aaPredicted RBP13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 CLCF1Q9UBD9 225 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 SLC5A6Q9Y289 635 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 MED31Q9Y3C7 131 aa13.09□□□□□ -0.31
SCAMP4-209ENST00000585335 CFAP46Q8IYW2 2715 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms