RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 C11orf65Q8NCR3 313 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 C10orf82Q8WW14 230 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 ZHX1-C8orf76Q96EF9 292 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 WFIKKN1Q96NZ8 548 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 OR11A1Q9GZK7 315 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 OR10A4Q9H209 315 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 EVA1AQ9H8M9 152 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 IGHV3-15A0A0B4J1V0 119 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 PRORSD1PA6NEY8 169 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 BBIP1A8MTZ0 92 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 CASKO14936 926 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 EIF1BO60739 113 aaKnown RBP12.42□□□□□ -0.42
GGA3-215ENST00000582821 FESP07332 822 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 PPP3CBP16298 524 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 CCKARP32238 428 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 KCNJ5P48544 419 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 GZMMP51124 257 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 PCBP3P57721 371 aaKnown RBP12.42□□□□□ -0.42
GGA3-215ENST00000582821 SLC35A1P78382 337 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 SELPLGQ14242 412 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 TRMT5Q32P41 509 aaKnown RBP12.42□□□□□ -0.42
GGA3-215ENST00000582821 ABLIM2Q6H8Q1 611 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 NANOGP8Q6NSW7 305 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 TFAP2EQ6VUC0 442 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 STAC2Q6ZMT1 411 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 SLC30A8Q8IWU4 369 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 LSMEM1Q8N8F7 131 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 LRRC58Q96CX6 371 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 SH3GL1Q99961 368 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 GPATCH1Q9BRR8 931 aaKnown RBP12.42□□□□□ -0.42
GGA3-215ENST00000582821 HDHD5Q9BXW7 423 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 POLDIP3Q9BY77 421 aaKnown RBP12.42□□□□□ -0.42
GGA3-215ENST00000582821 NANOGQ9H9S0 305 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 ANGPT4Q9Y264 503 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 GPR52Q9Y2T5 361 aa12.42□□□□□ -0.42
GGA3-215ENST00000582821 ZNF716A6NP11 495 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 A8MVM7 634 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 TPST1O60507 370 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 NPIPB7O75200 414 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 MFN2O95140 757 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 CNOT4O95628 575 aaKnown RBP12.41□□□□□ -0.42
GGA3-215ENST00000582821 IMPDH2P12268 514 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 KLK2P20151 261 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 CCNA2P20248 432 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 PSMB1P20618 241 aaKnown RBP12.41□□□□□ -0.42
GGA3-215ENST00000582821 OR3A2P47893 321 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 SLC16A1P53985 500 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 OR2B6P58173 313 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 MTPNP58546 118 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 SF3A3Q12874 501 aaKnown RBP eCLIP12.41□□□□□ -0.42
GGA3-215ENST00000582821 GALNT5Q7Z7M9 940 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 ATG4DQ86TL0 474 aaPredicted RBP12.41□□□□□ -0.42
GGA3-215ENST00000582821 GABRG1Q8N1C3 465 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 CADM2Q8N3J6 435 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 OR8J3Q8NGG0 315 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 PIGXQ8TBF5 258 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 STK35Q8TDR2 534 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 C3orf49Q96BT1 292 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 CLEC4MQ9H2X3 399 aaPredicted RBP12.41□□□□□ -0.42
GGA3-215ENST00000582821 C12orf49Q9H741 205 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 C12orf10Q9HB07 376 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 ZNF226Q9NYT6 803 aa12.41□□□□□ -0.42
GGA3-215ENST00000582821 ALPK2Q86TB3 2170 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 ZC3H12DA2A288 527 aaKnown RBP12.4□□□□□ -0.42
GGA3-215ENST00000582821 ENO4A6NNW6 628 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 TMEM229AB2RXF0 380 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 M0QX08 132 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 FXYD1O00168 92 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 GPR171O14626 319 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 GCM2O75603 506 aaPredicted RBP12.4□□□□□ -0.42
GGA3-215ENST00000582821 HRGP04196 525 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 C8BP07358 591 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 FPR1P21462 350 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 CRYGSP22914 178 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 PCGF2P35227 344 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 DMTNQ08495 405 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 CAPRIN1Q14444 709 aaKnown RBP12.4□□□□□ -0.42
GGA3-215ENST00000582821 P2RY6Q15077 328 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 CYP51A1Q16850 503 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 EXOC3L2Q2M3D2 409 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 MMEL1Q495T6 779 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 PAQR6Q6TCH4 344 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 C6orf89Q6UWU4 347 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 CDH24Q86UP0 819 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 COMTD1Q86VU5 262 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 CALHM3Q86XJ0 350 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 CDC20BQ86Y33 519 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 ARMC8Q8IUR7 673 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 OR10A6Q8NH74 314 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 DNAJA4Q8WW22 397 aaPredicted RBP12.4□□□□□ -0.42
GGA3-215ENST00000582821 ZNF300Q96RE9 604 aaPredicted RBP12.4□□□□□ -0.42
GGA3-215ENST00000582821 NAA11Q9BSU3 229 aaPredicted RBP12.4□□□□□ -0.42
GGA3-215ENST00000582821 MED18Q9BUE0 208 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 TRIM2Q9C040 744 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 KLHL4Q9C0H6 718 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 PIF1Q9H611 641 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 EMC3Q9P0I2 261 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 CAPN7Q9Y6W3 813 aa12.4□□□□□ -0.42
GGA3-215ENST00000582821 MAP1AP78559 2803 aaPredicted RBP12.39□□□□□ -0.43
GGA3-215ENST00000582821 AKAP9Q99996 3911 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms