RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 LGALS2P05162 132 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 PCCBP05166 539 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 GIPP09681 153 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 ATP6V1C1P21283 382 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 DRD5P21918 477 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 UQCRC2P22695 453 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 HTR1FP30939 366 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 CA8P35219 290 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 ACAA2P42765 397 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 PPOXP50336 477 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 SH3BGRP55822 239 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 TAS2R19P59542 299 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 KRTAP10-8P60410 259 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 RAP1BP61224 184 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 SELPLGQ14242 412 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 NRF1Q16656 503 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 SLC25A52Q3SY17 297 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 C1orf100Q5SVJ3 147 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 GPRC6AQ5T6X5 926 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 TPGS2Q68CL5 300 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 PYHIN1Q6K0P9 492 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 IGFL3Q6UXB1 125 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 TMIGD1Q6UXZ0 262 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 RFLNAQ6ZTI6 216 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 ZNF429Q86V71 674 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 SLC38A6Q8IZM9 456 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 CLEC4FQ8N1N0 589 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 ZNF786Q8N393 782 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 HTR3CQ8WXA8 447 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 CTNNBL1Q8WYA6 563 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 C16orf45Q96MC5 204 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 AMDHD1Q96NU7 426 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 OMDQ99983 421 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 NIPSNAP3BQ9BS92 247 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 TPPP3Q9BW30 176 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 IL36GQ9NZH8 169 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 EPS15L1Q9UBC2 864 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 ZNF223Q9UK11 482 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 TRAF3IP3Q9Y228 551 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 RASD1Q9Y272 281 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 SH3TC1Q8TE82 1336 aa2.85□□□□□ -1.95
SMCHD1-204ENST00000581226 RLFQ13129 1914 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 IGKV1D-8A0A087WSZ0 117 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 IGHV1OR21-1A0A087WYE8 117 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 A0A1B0GWJ7 208 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 TRDCB7Z8K6 153 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 HIP1O00291 1037 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 DCTN6O00399 190 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 N4BP1O75113 896 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 CALCRP30988 508 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 SHMT2P34897 504 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 PTGDSP41222 190 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 P2RY1P47900 373 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 TDO2P48775 406 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 LHX2P50458 406 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 KPNA2P52292 529 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 KLHL30Q0D2K2 578 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 SLC36A3Q495N2 470 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 TFDP3Q5H9I0 405 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 GALNT17Q6IS24 598 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 ACP7Q6ZNF0 438 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 ZNF571Q7Z3V5 609 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 C6orf223Q8N319 242 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 MDS2Q8NDY4 140 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 CATSPER1Q8NEC5 780 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 MARCH1Q8TCQ1 289 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 FGF11Q92914 225 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 DTNBP1Q96EV8 351 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 SUDS3Q9H7L9 328 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 FOLH1BQ9HBA9 442 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 PALMDQ9NP74 551 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 BLOC1S6Q9UL45 172 aa2.84□□□□□ -1.95
SMCHD1-204ENST00000581226 NKX2-6A6NCS4 301 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 RSPH10B2B2RC85 870 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 KRTAP4-16G5E9R7 235 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 BTN3A3O00478 584 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 TAPBPO15533 448 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 DFNA5O60443 496 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 TNFSF13O75888 250 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 STAMBPO95630 424 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 GUCA1CO95843 209 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 PCCAP05165 728 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 RSPH10BP0C881 870 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 COX5AP20674 150 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 PAX7P23759 505 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 CXCR2P25025 360 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 RFC4P35249 363 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 CHI3L1P36222 383 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 KIR2DS4P43632 304 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 RPS14P62263 151 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 TIGD3Q6B0B8 471 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 RALGPS2Q86X27 583 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 ZDHHC21Q8IVQ6 265 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 RDH10Q8IZV5 341 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 STARD4Q96DR4 205 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 PELI1Q96FA3 418 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 SEC22AQ96IW7 307 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 OR2M2Q96R28 347 aa2.83□□□□□ -1.96
SMCHD1-204ENST00000581226 P2RY13Q9BPV8 354 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms