RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 INPP5JQ15735 1006 aaPredicted RBP13.82□□□□□ -0.2
SS18-206ENST00000577572 INAQ16352 499 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 ZNF74Q16587 644 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 FAM69AQ5T7M9 428 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 GALNTL5Q7Z4T8 443 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 SLC22A16Q86VW1 577 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 SETD9Q8NE22 299 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 MFSD8Q8NHS3 518 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 POC1BQ8TC44 478 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 ZNF524Q96C55 264 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 FAM46AQ96IP4 442 aaKnown RBP13.82□□□□□ -0.2
SS18-206ENST00000577572 HRASLS5Q96KN8 279 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 JSRP1Q96MG2 331 aaPredicted RBP13.82□□□□□ -0.2
SS18-206ENST00000577572 MBOAT4Q96T53 435 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 APOL4Q9BPW4 351 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 KLHDC3Q9BQ90 382 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 TEX12Q9BXU0 123 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 ZNF703Q9H7S9 590 aaPredicted RBP13.82□□□□□ -0.2
SS18-206ENST00000577572 ACKR4Q9NPB9 350 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 TUBD1Q9UJT1 453 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 NDRG4Q9ULP0 352 aaKnown RBP13.82□□□□□ -0.2
SS18-206ENST00000577572 RAXQ9Y2V3 346 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 HDGFL3Q9Y3E1 203 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 ZNF337Q9Y3M9 751 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 CORINQ9Y5Q5 1042 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 CDH10Q9Y6N8 788 aa13.82□□□□□ -0.2
SS18-206ENST00000577572 CEP295Q9C0D2 2601 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 GMFGO60234 142 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 PTP4A3O75365 173 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 OR7A10O76100 309 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 AHSA1O95433 338 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 SAGP10523 405 aaPredicted RBP13.81□□□□□ -0.2
SS18-206ENST00000577572 POU2F1P14859 743 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 BMP7P18075 431 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 CHMP24386 653 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 PRPS1P60891 318 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 RAC1P63000 192 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 C1orf140Q5VVS0 124 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 RPUSD3Q6P087 351 aaKnown RBP13.81□□□□□ -0.2
SS18-206ENST00000577572 ZNF620Q6ZNG0 422 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 USP51Q70EK9 711 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 GALNT5Q7Z7M9 940 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 OAFQ86UD1 273 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 DEPDC4Q8N2C3 294 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 MARVELD2Q8N4S9 558 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 PFN4Q8NHR9 129 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 TRUB1Q8WWH5 349 aaKnown RBP13.81□□□□□ -0.2
SS18-206ENST00000577572 GPA33Q99795 319 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 PRRG3Q9BZD7 231 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 RIBC2Q9H4K1 309 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 SLC25A19Q9HC21 320 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 C20orf141Q9NUB4 165 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 BAIAP2Q9UQB8 552 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 TRAPPC4Q9Y296 219 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 HRH3Q9Y5N1 445 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 MED13Q9UHV7 2174 aa13.81□□□□□ -0.2
SS18-206ENST00000577572 ACACAQ13085 2346 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 HEATR5AQ86XA9 2040 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 A0A0G2JMM0 328 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 A0A1W2PPB8 328 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 A0A1W2PRS3 328 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 TMEM72A0PK05 275 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 ZAR1LA6NP61 321 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 KIR3DP1A8MWS1 328 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 G3V3Y1 287 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 DNPH1O43598 174 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 MPZL2O60487 215 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 MITFO75030 526 aaPredicted RBP13.8□□□□□ -0.2
SS18-206ENST00000577572 F10P00742 488 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 TSPAN19P0C672 248 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 ASAH2BP0C7U1 165 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 FUT1P19526 365 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 MAKP20794 623 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 MYF6P23409 242 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 GDF1P27539 372 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 GPR4P46093 362 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 MEOX1P50221 254 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 SMSP52788 366 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 NUP107P57740 925 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 GPR85P60893 370 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 RPS4XP62701 263 aaKnown RBP13.8□□□□□ -0.2
SS18-206ENST00000577572 LSM11P83369 360 aaKnown RBP eCLIP13.8□□□□□ -0.2
SS18-206ENST00000577572 IL1RL1Q01638 556 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 FOXD4Q12950 439 aaPredicted RBP13.8□□□□□ -0.2
SS18-206ENST00000577572 TBR1Q16650 682 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 ZBED5Q49AG3 693 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 SYT14P1Q58G82 188 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 C6orf52Q5T4I8 152 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 ANKRD34AQ69YU3 496 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 SMARCD3Q6STE5 483 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 Q6ZS92 163 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 MAMDC2Q7Z304 686 aaPredicted RBP13.8□□□□□ -0.2
SS18-206ENST00000577572 FAM109AQ8N4B1 249 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 SCAIQ8N9R8 606 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 KDF1Q8NAX2 398 aaPredicted RBP13.8□□□□□ -0.2
SS18-206ENST00000577572 TEX47Q8TBZ9 253 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 CYGBQ8WWM9 190 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 TTTY12Q9BZ98 90 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 ADNPQ9H2P0 1102 aa13.8□□□□□ -0.2
SS18-206ENST00000577572 NANSQ9NR45 359 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms