RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 ENPP4Q9Y6X5 453 aa12.56□□□□□ -0.4
RPAIN-217ENST00000575711 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 ZC3H12DA2A288 527 aaKnown RBP12.55□□□□□ -0.4
RPAIN-217ENST00000575711 SLC22A20A6NK97 555 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 hCG_2039718K7EN88 272 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 SULT2B1O00204 365 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 LRRTM2O43300 516 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 SEMA7AO75326 666 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 CIB2O75838 187 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 SYNGR4O95473 234 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 SEMG1P04279 462 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 FABP3P05413 133 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 THRBP10828 461 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 IDUAP35475 653 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 DIO1P49895 249 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 RAC3P60763 192 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 ST3GAL3Q11203 375 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 MYBPHQ13203 477 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 FAM98BQ52LJ0 330 aaKnown RBP12.55□□□□□ -0.4
RPAIN-217ENST00000575711 MTFR2Q6P444 385 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 TTC33Q6PID6 262 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-217ENST00000575711 TMPPEQ6ZT21 453 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 P4HA3Q7Z4N8 544 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 ADGRE4PQ86SQ3 457 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 TSPYL5Q86VY4 417 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-217ENST00000575711 SPATA24Q86W54 205 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 RPRMLQ8N4K4 120 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 CPNE4Q96A23 557 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-217ENST00000575711 ZNF845Q96IR2 970 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-217ENST00000575711 MPP4Q96JB8 637 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 ARL5BQ96KC2 179 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 C7orf34Q96L11 122 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 ZNF300Q96RE9 604 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-217ENST00000575711 UCN2Q96RP3 112 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 SEPHS2Q99611 448 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 EPYCQ99645 322 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 TTYH2Q9BSA4 534 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 FNDC11Q9BVV2 318 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 POTEKPQ9BYX7 375 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 PRRG4Q9BZD6 226 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 MAGIXQ9H6Y5 334 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 NDUFAF4Q9P032 175 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 MCTS1Q9ULC4 181 aaKnown RBP12.55□□□□□ -0.4
RPAIN-217ENST00000575711 A4GNTQ9UNA3 340 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 SLC5A6Q9Y289 635 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 ZNF175Q9Y473 711 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 DNAJC13O75165 2243 aa12.55□□□□□ -0.4
RPAIN-217ENST00000575711 PRRC2CQ9Y520 2896 aaKnown RBP12.54□□□□□ -0.4
RPAIN-217ENST00000575711 J3KTA2 159 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 LYPD3O95274 346 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 AHSA1O95433 338 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 PMS2P2O95744 297 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 THY1P04216 161 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 FCGR2AP12318 317 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 RHCEP18577 417 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 PER3P56645 1201 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 OR2B6P58173 313 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 VLDLRP98155 873 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 CHRNB3Q05901 458 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 PON3Q15166 354 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 C1orf146Q5VVC0 180 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 C1orf140Q5VVS0 124 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 OFCC1Q8IZS5 231 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 WNT2BQ93097 391 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 ZHX1-C8orf76Q96EF9 292 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 DNAJA3Q96EY1 480 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 DMRTA2Q96SC8 542 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 TM9SF2Q99805 663 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 TMEM43Q9BTV4 400 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 TAPBPLQ9BX59 468 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 SRXN1Q9BYN0 137 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 IL1RAPQ9NPH3 570 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 CLCF1Q9UBD9 225 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 TRAPPC4Q9Y296 219 aa12.54□□□□□ -0.4
RPAIN-217ENST00000575711 ZGRF1Q86YA3 2104 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 IGKV1D-42A0A075B6H8 117 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 TRAV36DV7A0A075B6V5 113 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 DHRS12A0PJE2 317 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 MBD3L4A6NDZ8 208 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 MBD3L3A6NE82 208 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 MBD3L5A6NJ08 208 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 KDM4EB2RXH2 506 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 OR2T1O43869 369 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 NPIPB7O75200 414 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 IL2RAP01589 272 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 GPIP06744 558 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 GLI4P10075 376 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 UMPSP11172 480 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 IMPDH2P12268 514 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 HOXB6P17509 224 aaKnown RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 ENPP1P22413 925 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 TIMP3P35625 211 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 RBM34P42696 430 aaKnown RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 RPS5P46782 204 aaKnown RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 NUP107P57740 925 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 SLC35A1P78382 337 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 EGR4Q05215 589 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 PMPCAQ10713 525 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 FOXD4Q12950 439 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms