RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SH3GLB1Q9Y371 365 aa11.45□□□□□ -0.58
TRAPPC1-206ENST00000573989 ICE1Q9Y2F5 2266 aa11.45□□□□□ -0.58
TRAPPC1-206ENST00000573989 SPTAN1Q13813 2472 aaKnown RBP11.45□□□□□ -0.58
TRAPPC1-206ENST00000573989 TMEM72A0PK05 275 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 KDM4EB2RXH2 506 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 M0R3H8 397 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 EIF1BO60739 113 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 RNF224P0DH78 156 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 HSD17B1P14061 328 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 BMP5P22003 454 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 ENPP1P22413 925 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 CTBP2P56545 445 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 SLC35A1P78382 337 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 MYBPHQ13203 477 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 GLYATQ6IB77 296 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 ZNF613Q6PF04 617 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 FCRLAQ7L513 359 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 ATG4DQ86TL0 474 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 GPR32P1Q8NGA4 272 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 VANGL1Q8TAA9 524 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 STK35Q8TDR2 534 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 GMPPAQ96IJ6 420 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 TACO1Q9BSH4 297 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 TAPBPLQ9BX59 468 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 POTEKPQ9BYX7 375 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 POLR2J2Q9GZM3 115 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 POLR2J3Q9H1A7 115 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 C1orf21Q9H246 121 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 PIGMQ9H3S5 423 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 COQ10BQ9H8M1 238 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 MAGEL2Q9UJ55 1249 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 EMC9Q9Y3B6 208 aa11.44□□□□□ -0.58
TRAPPC1-206ENST00000573989 A0A0B4J2E0 115 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 A0A1B0GWA3 101 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 A0A1B0GX12 115 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 A1L4Q6 167 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 FAM90A27PA6NNH2 459 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 PRSS44E7EML9 344 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 PRKD3O94806 890 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 AHSA1O95433 338 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 ZNF682O95780 498 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 GPIP06744 558 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 GGT1P19440 569 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 TCN1P20061 433 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 HTR2AP28223 471 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 IDUAP35475 653 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 OR2B6P58173 313 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 ENTPD8Q5MY95 495 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 C6orf89Q6UWU4 347 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 PLXDC2Q6UX71 529 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 FKBP9P1Q75LS8 142 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 COMTD1Q86VU5 262 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 CARM1Q86X55 608 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 GCNT2Q8N0V5 402 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 RNF148Q8N7C7 305 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 CNEP1R1Q8N9A8 125 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 NAXEQ8NCW5 288 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 RBM15BQ8NDT2 890 aaKnown RBP11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 OR6T1Q8NGN1 323 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 SLC38A4Q969I6 547 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 ARL5BQ96KC2 179 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 EPYCQ99645 322 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 NAA11Q9BSU3 229 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 OR11A1Q9GZK7 315 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 GP6Q9HCN6 339 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 KLHL9Q9P2J3 617 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 PLEKHB1Q9UF11 243 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 EGFL7Q9UHF1 273 aa11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 SAMD4AQ9UPU9 718 aaKnown RBP11.43□□□□□ -0.58
TRAPPC1-206ENST00000573989 USP9YO00507 2555 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 HCFC1P51610 2035 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 A0A1W2PNV4 684 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 TRAPPC13A5PLN9 417 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 CPSF4LA6NMK7 179 aaKnown RBP11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 CHP2O43745 196 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 OR2T1O43869 369 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 AQP8O94778 261 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 STAMBPO95630 424 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 SERPINA1P01009 418 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 GTF2E2P29084 291 aaKnown RBP11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 ASCL1P50553 236 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 RASSF2P50749 326 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 CRYBA2P53672 197 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 TAS2R41P59536 307 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 BNIP2Q12982 314 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 TMEM201Q5SNT2 666 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 C1orf140Q5VVS0 124 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 CBLL1Q75N03 491 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 FAM214BQ7L5A3 538 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 PIGXQ8TBF5 258 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 ADAMTS16Q8TE57 1224 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 RNF128Q8TEB7 428 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 GEMIN6Q8WXD5 167 aaKnown RBP11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 ROBO4Q8WZ75 1007 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 MPP4Q96JB8 637 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 RSPO3Q9BXY4 272 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 SRXN1Q9BYN0 137 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 PCDHAC1Q9H158 963 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 GORASP2Q9H8Y8 452 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms