RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 A0A1W2PR80 420 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 DPRXA6NFQ7 191 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 CFAP73A6NFT4 308 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 KLF11O14901 512 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 RAD51DO75771 328 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 CD3EP07766 207 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 PRG2P13727 222 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 HOXB4P17483 251 aaPredicted RBP12.15□□□□□ -0.46
RAB40B-204ENST00000571554 FOXG1P55316 489 aaPredicted RBP12.15□□□□□ -0.46
RAB40B-204ENST00000571554 BSPH1Q075Z2 132 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 BNIP2Q12982 314 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 GNA13Q14344 377 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 TTMPQ5BVD1 217 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 NCMAPQ5T1S8 102 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 C9orf135Q5VTT2 229 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 CLIP4Q8N3C7 705 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 PIGXQ8TBF5 258 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 LRRC8CQ8TDW0 803 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 HSD17B8Q92506 261 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 MAL2Q969L2 176 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 DDIT4LQ96D03 193 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 PAIP1Q9H074 479 aaKnown RBP12.15□□□□□ -0.46
RAB40B-204ENST00000571554 EMC3Q9P0I2 261 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 TMEM181Q9P2C4 612 aa12.15□□□□□ -0.46
RAB40B-204ENST00000571554 IGKV3D-15A0A087WSY6 115 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 FAM234BA2RU67 622 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 CDHR4A6H8M9 788 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 POLR3GO15318 223 aaPredicted RBP12.14□□□□□ -0.47
RAB40B-204ENST00000571554 FRS3O43559 492 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 TFPTP0C1Z6 253 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 ZCCHC18P0CG32 403 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 COX5AP20674 150 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 SLC1A3P43003 542 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 HTR3AP46098 478 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 IDH3AP50213 366 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 CRISP3P54108 245 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 STX1BP61266 288 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 TXNL4AP83876 142 aaKnown RBP12.14□□□□□ -0.47
RAB40B-204ENST00000571554 FAPQ12884 760 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 PPA1Q15181 289 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 LIN52Q52LA3 116 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 CLEC9AQ6UXN8 241 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 CASP12Q6UXS9 341 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 BIVMQ86UB2 503 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 ZNF433Q8N7K0 673 aaPredicted RBP12.14□□□□□ -0.47
RAB40B-204ENST00000571554 ZNF611Q8N823 705 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 OR52E4Q8NGH9 312 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 IGFBPL1Q8WX77 278 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 GTF2H4Q92759 462 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 APH1AQ96BI3 265 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 THOC1Q96FV9 657 aaKnown RBP12.14□□□□□ -0.47
RAB40B-204ENST00000571554 ESRP2Q9H6T0 727 aaKnown RBP12.14□□□□□ -0.47
RAB40B-204ENST00000571554 NGBQ9NPG2 151 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 TCF7L2Q9NQB0 619 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 NPAP1Q9NZP6 1156 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 PCDHB14Q9Y5E9 798 aa12.14□□□□□ -0.47
RAB40B-204ENST00000571554 DSPPQ9NZW4 1301 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CADP27708 2225 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CIB4A0PJX0 185 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CCT8L1PA6NM43 557 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CLIC1O00299 241 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 NR5A2O00482 541 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 MRPL33O75394 65 aaKnown RBP12.13□□□□□ -0.47
RAB40B-204ENST00000571554 AKR7A3O95154 331 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 SOD3P08294 240 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 UQCRBP14927 111 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 GGT1P19440 569 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 NCF2P19878 526 aaPredicted RBP12.13□□□□□ -0.47
RAB40B-204ENST00000571554 PTNP21246 168 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CXCR1P25024 350 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 ACAA2P42765 397 aaKnown RBP12.13□□□□□ -0.47
RAB40B-204ENST00000571554 MAGEA8P43361 318 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 SLC35A1P78382 337 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 HOXC5Q00444 222 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 LTBQ06643 244 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CEACAM7Q14002 265 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 OR7A5Q15622 319 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 FBXW9Q5XUX1 488 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 MSANTD1Q6ZTZ1 278 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 SERPINA11Q86U17 422 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 TMEM99Q8N816 258 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 DYDC1Q8WWB3 177 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 FBXW5Q969U6 566 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 ATP6V1G3Q96LB4 118 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 C7orf26Q96N11 449 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 GSX2Q9BZM3 304 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CXorf56Q9H5V9 222 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CALML5Q9NZT1 146 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CCDC167Q9P0B6 97 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 SLAMF8Q9P0V8 285 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 CHST2Q9Y4C5 530 aa12.13□□□□□ -0.47
RAB40B-204ENST00000571554 TMEM247A6NEH6 219 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 FAAHO00519 579 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 ZNF208O43345 1280 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 CNOT4O95628 575 aaKnown RBP12.12□□□□□ -0.47
RAB40B-204ENST00000571554 LY6G6DO95868 133 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 IDUAP35475 653 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 CDKN1AP38936 164 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 CLK1P49759 484 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms