RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 VRK2Q86Y07 508 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 AQP12AQ8IXF9 295 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 GTPBP8Q8N3Z3 284 aaPredicted RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 SMYD1Q8NB12 490 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 FNDC9Q8TBE3 224 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 TPD52L3Q96J77 140 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 ADGRG7Q96K78 797 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 RNF145Q96MT1 663 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 CXXC4Q9H2H0 198 aa13.55□□□□□ -0.24
RAB40B-203ENST00000570676 DENND2DQ9H6A0 471 aaPredicted RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 CCM2LQ9NUG4 571 aaPredicted RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 SAMD4AQ9UPU9 718 aaKnown RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF443Q9Y2A4 671 aaPredicted RBP13.55□□□□□ -0.24
RAB40B-203ENST00000570676 A0A087WZY1 265 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 A0A1W2PPR1 153 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 TCRBV5S2A0A599 114 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 GOSR1O95249 250 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 THBS1P07996 1170 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 CD247P20963 164 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 ACTR3P61158 418 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 SELENOWP63302 87 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 SIRPAP78324 504 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF117Q03924 483 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 CCNIQ14094 377 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 LIN52Q52LA3 116 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 KLHL26Q53HC5 615 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF474Q6S9Z5 364 aaPredicted RBP13.54□□□□□ -0.24
RAB40B-203ENST00000570676 PAMR1Q6UXH9 720 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 ZNF836Q6ZNA1 936 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 BTLAQ7Z6A9 289 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 MISPQ8IVT2 679 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 CNEP1R1Q8N9A8 125 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 POC1BQ8TC44 478 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 RASSF5Q8WWW0 418 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 OIT3Q8WWZ8 545 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 LZICQ8WZA0 190 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 ZBTB8AQ96BR9 441 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 SH3YL1Q96HL8 342 aaPredicted RBP13.54□□□□□ -0.24
RAB40B-203ENST00000570676 RSRC1Q96IZ7 334 aaKnown RBP13.54□□□□□ -0.24
RAB40B-203ENST00000570676 FOXC2Q99958 501 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 HHATLQ9HCP6 504 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.54□□□□□ -0.24
RAB40B-203ENST00000570676 MED17Q9NVC6 651 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 PLEKHA6Q9Y2H5 1048 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 TESMINQ9Y4I5 508 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 DTNAQ9Y4J8 743 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 V9GYQ6 96 aa13.54□□□□□ -0.24
RAB40B-203ENST00000570676 RAI1Q7Z5J4 1906 aaPredicted RBP13.53□□□□□ -0.24
RAB40B-203ENST00000570676 HEATR5AQ86XA9 2040 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 SH3D21A4FU49 640 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 SERINC4A6NH21 518 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 OIP5O43482 229 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 TPST1O60507 370 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 SMNDC1O75940 238 aaKnown RBP eCLIP13.53□□□□□ -0.24
RAB40B-203ENST00000570676 AQP8O94778 261 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 PRKD3O94806 890 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 CGAP01215 116 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 HRGP04196 525 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 LINGO3P0C6S8 592 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 FCGR2AP12318 317 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 NID1P14543 1247 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 PRKAR1BP31321 381 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 KCNJ5P48544 419 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 PCYT1AP49585 367 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 RPS3AP61247 264 aaKnown RBP13.53□□□□□ -0.24
RAB40B-203ENST00000570676 DUSP7Q16829 419 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 DHRS4L2Q6PKH6 230 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 FAM86B1Q8N7N1 296 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 GPR32P1Q8NGA4 272 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 DACH2Q96NX9 599 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 RSPO3Q9BXY4 272 aaPredicted RBP13.53□□□□□ -0.24
RAB40B-203ENST00000570676 OPN3Q9H1Y3 402 aaPredicted RBP13.53□□□□□ -0.24
RAB40B-203ENST00000570676 SLC13A4Q9UKG4 626 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 BAG5Q9UL15 447 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 CELSR1Q9NYQ6 3014 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 ABCA4P78363 2273 aa13.53□□□□□ -0.24
RAB40B-203ENST00000570676 TCRBV3S1A0A5B6 114 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 CLDN24A6NM45 220 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 TMEM229AB2RXF0 380 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 H3BNH8 94 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 EIF1AYO14602 144 aaKnown RBP13.52□□□□□ -0.25
RAB40B-203ENST00000570676 FESP07332 822 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 CD8BP10966 210 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 SLC6A8P48029 635 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 ZNF41P51814 821 aaPredicted RBP13.52□□□□□ -0.25
RAB40B-203ENST00000570676 KCNJ10P78508 379 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 FAM27E3Q08E93 113 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 FOXF1Q12946 379 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 FGFBP1Q14512 234 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 MRPL2Q5T653 305 aaKnown RBP13.52□□□□□ -0.25
RAB40B-203ENST00000570676 RNF220Q5VTB9 566 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 FKBP9P1Q75LS8 142 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 VTCN1Q7Z7D3 282 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 CMIPQ8IY22 773 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 OR10D3Q8NH80 312 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 B4GALNT2Q8NHY0 566 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 PHOSPHO1Q8TCT1 267 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 PROX1Q92786 737 aa13.52□□□□□ -0.25
RAB40B-203ENST00000570676 POP5Q969H6 163 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms