RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TMEM5Q9Y2B1 443 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 ZNF835Q9Y2P0 537 aa21.12■□□□□ 0.97
RAB40C-212ENST00000569575 SHISA8B8ZZ34 492 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 ANKRD65E5RJM6 399 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 H0YHG0 523 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 TNFRSF11BO00300 401 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 EIF1BO60739 113 aaKnown RBP21.11■□□□□ 0.97
RAB40C-212ENST00000569575 WDR1O75083 606 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 FZD7O75084 574 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 MT-ND1P03886 318 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 TFPIP10646 304 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 DNAJA1P31689 397 aaKnown RBP21.11■□□□□ 0.97
RAB40C-212ENST00000569575 LIMS1P48059 325 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 RAC3P60763 192 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 FOXK1P85037 733 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 C1orf140Q5VVS0 124 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 POMZP3Q6PJE2 187 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 Q6ZPB1 254 aaPredicted RBP21.11■□□□□ 0.97
RAB40C-212ENST00000569575 MBOAT2Q6ZWT7 520 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 GGNQ86UU5 652 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 FAM57AQ8TBR7 257 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 SLC7A13Q8TCU3 470 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 MIB2Q96AX9 1013 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 BBC3Q96PG8 261 aaPredicted RBP21.11■□□□□ 0.97
RAB40C-212ENST00000569575 ALPK1Q96QP1 1244 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 UCN2Q96RP3 112 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 OSBPL10Q9BXB5 764 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 SAMHD1Q9Y3Z3 626 aaKnown RBP21.11■□□□□ 0.97
RAB40C-212ENST00000569575 TESMINQ9Y4I5 508 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 LYVE1Q9Y5Y7 322 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 GTF3C1Q12789 2109 aa21.11■□□□□ 0.97
RAB40C-212ENST00000569575 ARRDC5A6NEK1 342 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 FIGNL2A6NMB9 653 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 PRRG2O14669 202 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 DIRAS1O95057 198 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 ABOP16442 354 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 TCEA1P23193 301 aaKnown RBP21.1■□□□□ 0.97
RAB40C-212ENST00000569575 IDUAP35475 653 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 MLLT10P55197 1068 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 CTBP2P56545 445 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 SLC35A1P78382 337 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 EGR4Q05215 589 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 ANKDD1AQ495B1 522 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 SOWAHCQ53LP3 525 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-212ENST00000569575 FGD3Q5JSP0 725 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 ZNF730Q6ZMV8 503 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 NKAIN4Q8IVV8 208 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 OR2V1Q8NHB1 315 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 LIPHQ8WWY8 451 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 PYDC1Q8WXC3 89 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 CPNE4Q96A23 557 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-212ENST00000569575 ZHX1-C8orf76Q96EF9 292 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 CENPNQ96H22 339 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-212ENST00000569575 ADGRG7Q96K78 797 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 FUZQ9BT04 418 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 TAPBPLQ9BX59 468 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 CORINQ9Y5Q5 1042 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 IGSF10Q6WRI0 2623 aa21.1■□□□□ 0.97
RAB40C-212ENST00000569575 SVILO95425 2214 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 IGKV1D-42A0A075B6H8 117 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 A0A087WUU8 490 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 NPIPA2E9PIF3 369 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 NPIPA3F8WFD2 350 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 TIPRLO75663 272 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 IL11P20809 199 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 CARD18P57730 90 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 ELF3P78545 371 aaPredicted RBP21.09■□□□□ 0.97
RAB40C-212ENST00000569575 PRKCDQ05655 676 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 CTU2Q2VPK5 515 aaKnown RBP21.09■□□□□ 0.97
RAB40C-212ENST00000569575 GXYLT1Q4G148 440 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 PRR30Q53SZ7 412 aaPredicted RBP21.09■□□□□ 0.97
RAB40C-212ENST00000569575 CHERPQ8IWX8 916 aaKnown RBP21.09■□□□□ 0.97
RAB40C-212ENST00000569575 GALNT11Q8NCW6 608 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 OR5B2Q96R09 309 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 RHCGQ9UBD6 479 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 ZNF175Q9Y473 711 aa21.09■□□□□ 0.97
RAB40C-212ENST00000569575 A0A0J9YW62 118 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 SH3PXD2BA1X283 911 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 SULT2B1O00204 365 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 EIF1AYO14602 144 aaKnown RBP21.08■□□□□ 0.97
RAB40C-212ENST00000569575 FPR1P21462 350 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 SFTPDP35247 375 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 STARP49675 285 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 ERFP50548 548 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 CASP6P55212 293 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 MYBPHQ13203 477 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 HBMQ6B0K9 141 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 PODNL1Q6PEZ8 512 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 WDR88Q6ZMY6 472 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 SVOPLQ8N434 492 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 ZNF843Q8N446 348 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 OR4C15Q8NGM1 316 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 TMEM255BQ8WV15 326 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 PSD2Q9BQI7 771 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 DCLRE1BQ9H816 532 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 FKRPQ9H9S5 495 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 CALHM2Q9HA72 323 aa21.08■□□□□ 0.97
RAB40C-212ENST00000569575 C6orf203Q9P0P8 240 aaPredicted RBP21.08■□□□□ 0.97
RAB40C-212ENST00000569575 FAM208BQ5VWN6 2430 aa21.07■□□□□ 0.96
RAB40C-212ENST00000569575 H0Y3Z8 333 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms