RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 FBXW12Q6X9E4 464 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 OR9Q2Q8NGE9 314 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 C16orf78Q8WTQ4 265 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 TMEM239Q8WW34 195 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 ZNF689Q96CS4 500 aaPredicted RBP6.65□□□□□ -1.34
CNOT1-216ENST00000569240 AHCYL2Q96HN2 611 aaKnown RBP6.65□□□□□ -1.34
CNOT1-216ENST00000569240 SLC2A9Q9NRM0 540 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 A0A1W2PPV4 95 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 SMIM30A4D0T7 59 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 HHLA1C9JL84 531 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 PTBP3O95758 552 aaKnown RBP6.65□□□□□ -1.34
CNOT1-216ENST00000569240 SMIM10L2AP0DMW4 78 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 SMIM10L2BP0DMW5 78 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 OR12D1P0DN82 309 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 CTSEP14091 401 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 ACTR1BP42025 376 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 CLDN6P56747 220 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 CRHR2Q13324 411 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 ITPK1Q13572 414 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 DUSP28Q4G0W2 176 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 ADGRE4PQ86SQ3 457 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 OR7D4Q8NG98 312 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 OR2G2Q8NGZ5 317 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 PINX1Q96BK5 328 aaKnown RBP6.65□□□□□ -1.34
CNOT1-216ENST00000569240 GPR137Q96N19 417 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 VAMP8Q9BV40 100 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 PRDM9Q9NQV7 894 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 ADARB2Q9NS39 739 aaKnown RBP6.65□□□□□ -1.34
CNOT1-216ENST00000569240 RHCGQ9UBD6 479 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 HS3ST4Q9Y661 456 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 ALDOCP09972 364 aaKnown RBP6.65□□□□□ -1.34
CNOT1-216ENST00000569240 LAMP1P11279 417 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 PTHLHP12272 177 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 TYRP1P17643 537 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 CD96P40200 585 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 FABP9Q0Z7S8 132 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 DOC2AQ14183 400 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 BRICD5Q6PL45 260 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 HFE2Q6ZVN8 426 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 FAM185AQ8N0U4 392 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 ZDHHC22Q8N966 263 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 TSLPQ969D9 159 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 CABLES2Q9BTV7 478 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 AMBRA1Q9C0C7 1298 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 ELP3Q9H9T3 547 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 FAM198AQ9UFP1 575 aa6.65□□□□□ -1.34
CNOT1-216ENST00000569240 HEMK1Q9Y5R4 338 aaPredicted RBP6.65□□□□□ -1.34
CNOT1-216ENST00000569240 RNASEK-C17orf49H0YIS7 233 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 SORBS2O94875 1100 aaKnown RBP6.65□□□□□ -1.35
CNOT1-216ENST00000569240 PLGP00747 810 aaPredicted RBP6.65□□□□□ -1.35
CNOT1-216ENST00000569240 CST4P01036 141 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 KIR2DL3P43628 341 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 CDKN2DP55273 166 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 MELKQ14680 651 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 RNF151Q2KHN1 245 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 BTNL8Q6UX41 500 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 OR2L13Q8N349 312 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 KDF1Q8NAX2 398 aaPredicted RBP6.65□□□□□ -1.35
CNOT1-216ENST00000569240 FBXW5Q969U6 566 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 MAP3K3Q99759 626 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 MIOXQ9UGB7 285 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 RIPK3Q9Y572 518 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 ZFP37Q9Y6Q3 630 aaPredicted RBP6.65□□□□□ -1.35
CNOT1-216ENST00000569240 OR5H14A6NHG9 310 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 APBB3O95704 486 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 HNRNPA3P51991 378 aaKnown RBP6.65□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF133P52736 654 aaPredicted RBP6.65□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF345Q14585 488 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 GLYR1Q49A26 553 aaPredicted RBP6.65□□□□□ -1.35
CNOT1-216ENST00000569240 FCRLAQ7L513 359 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 NAGSQ8N159 534 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 SIGLECL1Q8N7X8 197 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 L3MBTL4Q8NA19 623 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 OR52I1Q8NGK6 324 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 FAM213BQ8TBF2 198 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 LGALS14Q8TCE9 139 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 DGAT2Q96PD7 388 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 INTS14Q96SY0 518 aa6.65□□□□□ -1.35
CNOT1-216ENST00000569240 DDX31Q9H8H2 851 aaKnown RBP6.65□□□□□ -1.35
CNOT1-216ENST00000569240 FAM208AQ9UK61 1670 aaKnown RBP6.65□□□□□ -1.35
CNOT1-216ENST00000569240 A0A0B4J2A0 478 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 PEX10O60683 326 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 GPX5O75715 221 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 SIX6O95475 246 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 NOVP48745 357 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 AKR1C2P52895 323 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 C1orf220Q5T0J3 134 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 MAVSQ7Z434 540 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 OR5M9Q8NGP3 310 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 MSI2Q96DH6 328 aaKnown RBP6.64□□□□□ -1.35
CNOT1-216ENST00000569240 BSCL2Q96G97 398 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-216ENST00000569240 CLSTN3Q9BQT9 956 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 SPACA1Q9HBV2 294 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 MRPL22Q9NWU5 206 aaKnown RBP6.64□□□□□ -1.35
CNOT1-216ENST00000569240 SHPKQ9UHJ6 478 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 NOSIPQ9Y314 301 aaKnown RBP6.64□□□□□ -1.35
CNOT1-216ENST00000569240 COL5A2P05997 1499 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-216ENST00000569240 MAFKO60675 156 aa6.64□□□□□ -1.35
CNOT1-216ENST00000569240 PDGFBP01127 241 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-216ENST00000569240 HLA-DOBP13765 273 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms