RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ZNF385DQ9H6B1 395 aa26.07■■□□□ 1.76
RAB40C-211ENST00000568586 PRR14LQ5THK1 2151 aa26.06■■□□□ 1.76
RAB40C-211ENST00000568586 TMEM72A0PK05 275 aa26.06■■□□□ 1.76
RAB40C-211ENST00000568586 NR5A2O00482 541 aa26.06■■□□□ 1.76
RAB40C-211ENST00000568586 EDF1O60869 148 aaKnown RBP26.06■■□□□ 1.76
RAB40C-211ENST00000568586 PPIBP23284 216 aaKnown RBP26.06■■□□□ 1.76
RAB40C-211ENST00000568586 AGKQ53H12 422 aa26.06■■□□□ 1.76
RAB40C-211ENST00000568586 BEX5Q5H9J7 111 aa26.06■■□□□ 1.76
RAB40C-211ENST00000568586 GALNT5Q7Z7M9 940 aa26.06■■□□□ 1.76
RAB40C-211ENST00000568586 DDIT4LQ96D03 193 aa26.06■■□□□ 1.76
RAB40C-211ENST00000568586 ZHX1-C8orf76Q96EF9 292 aa26.06■■□□□ 1.76
RAB40C-211ENST00000568586 VAPAQ9P0L0 249 aa26.06■■□□□ 1.76
RAB40C-211ENST00000568586 PGM3O95394 542 aa26.05■■□□□ 1.76
RAB40C-211ENST00000568586 GKN3PP0CG01 181 aa26.05■■□□□ 1.76
RAB40C-211ENST00000568586 ETS2P15036 469 aa26.05■■□□□ 1.76
RAB40C-211ENST00000568586 BBS10Q8TAM1 723 aa26.05■■□□□ 1.76
RAB40C-211ENST00000568586 MAL2Q969L2 176 aa26.05■■□□□ 1.76
RAB40C-211ENST00000568586 POTEKPQ9BYX7 375 aa26.05■■□□□ 1.76
RAB40C-211ENST00000568586 ARMC7Q9H6L4 198 aa26.05■■□□□ 1.76
RAB40C-211ENST00000568586 EMC3Q9P0I2 261 aa26.05■■□□□ 1.76
RAB40C-211ENST00000568586 EIF1BO60739 113 aaKnown RBP26.04■■□□□ 1.76
RAB40C-211ENST00000568586 IMPDH2P12268 514 aa26.04■■□□□ 1.76
RAB40C-211ENST00000568586 GPX2P18283 190 aa26.04■■□□□ 1.76
RAB40C-211ENST00000568586 ITGADQ13349 1161 aa26.04■■□□□ 1.76
RAB40C-211ENST00000568586 WBP2NLQ6ICG8 309 aa26.04■■□□□ 1.76
RAB40C-211ENST00000568586 DLEU7Q6UYE1 221 aa26.04■■□□□ 1.76
RAB40C-211ENST00000568586 C10orf111Q8N326 155 aa26.04■■□□□ 1.76
RAB40C-211ENST00000568586 PIGXQ8TBF5 258 aa26.04■■□□□ 1.76
RAB40C-211ENST00000568586 S100PBPQ96BU1 408 aa26.04■■□□□ 1.76
RAB40C-211ENST00000568586 BEX4Q9NWD9 120 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-211ENST00000568586 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP26.03■■□□□ 1.76
RAB40C-211ENST00000568586 ADAP00813 363 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 ARAFP10398 606 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 EDNRAP25101 427 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 NR1H2P55055 460 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 SLC35A1P78382 337 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 TGIF2LYQ8IUE0 185 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 ZNF775Q96BV0 537 aaPredicted RBP26.03■■□□□ 1.76
RAB40C-211ENST00000568586 PIP5K1AQ99755 562 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 TMEM204Q9BSN7 226 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 TMUB1Q9BVT8 246 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 RSPO3Q9BXY4 272 aaPredicted RBP26.03■■□□□ 1.76
RAB40C-211ENST00000568586 ACANP16112 2415 aa26.03■■□□□ 1.76
RAB40C-211ENST00000568586 SETD2Q9BYW2 2564 aaPredicted RBP26.02■■□□□ 1.76
RAB40C-211ENST00000568586 ZC3H12DA2A288 527 aaKnown RBP26.02■■□□□ 1.76
RAB40C-211ENST00000568586 GPR171O14626 319 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 PRG2P13727 222 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 CCNA2P20248 432 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 ACKR1Q16570 336 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 ZNF311Q5JNZ3 666 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 DPP10Q8N608 796 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 TSPEARQ8WU66 669 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 HSD17B8Q92506 261 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 KISS1RQ969F8 398 aaPredicted RBP26.02■■□□□ 1.76
RAB40C-211ENST00000568586 IKZF5Q9H5V7 419 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 TMEM38AQ9H6F2 299 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 CACYBPQ9HB71 228 aaKnown RBP26.02■■□□□ 1.76
RAB40C-211ENST00000568586 PRSS50Q9UI38 385 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 TRIM33Q9UPN9 1127 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 CORO2BQ9UQ03 480 aa26.02■■□□□ 1.76
RAB40C-211ENST00000568586 COX5AP20674 150 aa26.01■■□□□ 1.75
RAB40C-211ENST00000568586 FLNAP21333 2647 aaKnown RBP26.01■■□□□ 1.75
RAB40C-211ENST00000568586 OR2B6P58173 313 aa26.01■■□□□ 1.75
RAB40C-211ENST00000568586 COPZ1P61923 177 aa26.01■■□□□ 1.75
RAB40C-211ENST00000568586 GCNT6Q5T4J0 391 aa26.01■■□□□ 1.75
RAB40C-211ENST00000568586 METTL21CQ5VZV1 264 aa26.01■■□□□ 1.75
RAB40C-211ENST00000568586 RAMP1O60894 148 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 FPR1P21462 350 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 IL32P24001 234 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 CXCR1P25024 350 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 PRKAR1BP31321 381 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 NTF4P34130 210 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 REEP3Q6NUK4 255 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 PAQR6Q6TCH4 344 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 SERPINA11Q86U17 422 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 CCDC103Q8IW40 242 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 THOC1Q96FV9 657 aaKnown RBP26■■□□□ 1.75
RAB40C-211ENST00000568586 NPHS2Q9NP85 383 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 DCTN4Q9UJW0 460 aa26■■□□□ 1.75
RAB40C-211ENST00000568586 RAI1Q7Z5J4 1906 aaPredicted RBP26■■□□□ 1.75
RAB40C-211ENST00000568586 LIPT2A6NK58 231 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 C5orf58C9J3I9 102 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 NPIPB7O75200 414 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 NCF2P19878 526 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-211ENST00000568586 CDK6Q00534 326 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 TSC22D1Q15714 1073 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 TAB1Q15750 504 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 ADRM1Q16186 407 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 RUNDC3AQ59EK9 446 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 SEZ6L2Q6UXD5 910 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 C20orf204Q6ZNR8 217 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 WFDC8Q8IUA0 241 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 ZNF100Q8IYN0 542 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 PIGTQ969N2 578 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 C3orf49Q96BT1 292 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 CPPED1Q9BRF8 314 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-211ENST00000568586 NAA11Q9BSU3 229 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-211ENST00000568586 ZNF446Q9NWS9 450 aa25.99■■□□□ 1.75
RAB40C-211ENST00000568586 LEF1Q9UJU2 399 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-211ENST00000568586 NOSIPQ9Y314 301 aaKnown RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms