RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 MAT2AP31153 395 aaKnown RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ADH7P40394 386 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ART1P52961 327 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 AP2S1P53680 142 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ADPRHP54922 357 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 SRP54P61011 504 aaKnown RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 RAP2BP61225 183 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 SIM1P81133 766 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 RASGEF1BQ0VAM2 473 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 FGFBP1Q14512 234 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 PRICKLE4Q2TBC4 344 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 TCTE1Q5JU00 501 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 C6orf183Q5T699 404 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 LCE2AQ5TA79 106 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 FHL5Q5TD97 284 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 FCRL6Q6DN72 434 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 WBP2NLQ6ICG8 309 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 FBXO42Q6P3S6 717 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 VN1R4Q7Z5H5 301 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 SPICQ8N5J4 248 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 SIRT6Q8N6T7 355 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 CSNK1A1LQ8N752 337 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ZFP41Q8N8Y5 198 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 AMER3Q8N944 861 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 OR4M2Q8NGB6 313 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 OR4M1Q8NGD0 313 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 OR2T4Q8NH00 348 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ZCCHC10Q8TBK6 192 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 SUN5Q8TC36 379 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 CCDC107Q8WV48 283 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ASB17Q8WXJ9 295 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 CNOT9Q92600 299 aaKnown RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 HOXB13Q92826 284 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 GHSRQ92847 366 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 RSPRY1Q96DX4 576 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 LRRC3BQ96PB8 259 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 FYTTD1Q96QD9 318 aaKnown RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 GFM1Q96RP9 751 aaKnown RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 GPX7Q96SL4 187 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 GDF15Q99988 308 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 PRSS27Q9BQR3 290 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF649Q9BS31 505 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF426Q9BUY5 554 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 RNF32Q9H0A6 362 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ADGRL4Q9HBW9 690 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 EXOSC3Q9NQT5 275 aaKnown RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 SLC17A5Q9NRA2 495 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 RXFP3Q9NSD7 469 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 SPHK1Q9NYA1 384 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 MAT2BQ9NZL9 334 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 CXXC1Q9P0U4 656 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-250ENST00000568290 MALT1Q9UDY8 824 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 ICAM5Q9UMF0 924 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 OR10H1Q9Y4A9 318 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 KCNE3Q9Y6H6 103 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 V9GY05 133 aa7.04□□□□□ -1.28
ATXN3-250ENST00000568290 LOC102723532A0A0G2JNH3 316 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 A0A1B0GUH1 482 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 A0A1B0GWA3 101 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 MEGF11A6BM72 1044 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 LINC00862A6NCI5 91 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 TRABD2BA6NFA1 517 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 SLC9B1P1A6NJY1 282 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 ELOA3DA6NLF2 546 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-250ENST00000568290 TMEM212A6NML5 194 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 PRAMEF26H0Y7S4 382 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 H0YGG7 62 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 CDC42EP2O14613 210 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 KHNYNO15037 678 aaKnown RBP7.03□□□□□ -1.28
ATXN3-250ENST00000568290 FRS3O43559 492 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 CREBL2O60519 120 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-250ENST00000568290 CTNSO60931 367 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 KHDRBS3O75525 346 aaKnown RBP7.03□□□□□ -1.28
ATXN3-250ENST00000568290 SCGNO76038 276 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 OR7A10O76100 309 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 APOL3O95236 402 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 PAHP00439 452 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 CSTAP01040 98 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 CSF1P09603 554 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 CHRNB1P11230 501 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 CTSEP14091 401 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 PRKCAP17252 672 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 SRMP19623 302 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 PSMB1P20618 241 aaKnown RBP7.03□□□□□ -1.28
ATXN3-250ENST00000568290 TBXA2RP21731 343 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 SLC2A5P22732 501 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 DNASE1P24855 282 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 SHC1P29353 583 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 PEBP1P30086 187 aaKnown RBP7.03□□□□□ -1.28
ATXN3-250ENST00000568290 RCVRNP35243 200 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 MAP3K8P41279 467 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 OR3A3P47888 321 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 HSD17B7P56937 341 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 ARF3P61204 181 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-250ENST00000568290 EGR3Q06889 387 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 CRYZQ08257 329 aaKnown RBP7.03□□□□□ -1.28
ATXN3-250ENST00000568290 BAMBIQ13145 260 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 RUNX2Q13950 521 aa7.03□□□□□ -1.28
ATXN3-250ENST00000568290 FAM53BQ14153 422 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms