RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZNF273Q14593 569 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SPHARQ15513 63 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SNRNP35Q16560 246 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 HYAL4Q2M3T9 481 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 C10orf120Q5SQS8 335 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 N4BP2L1Q5TBK1 243 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 TSPO2Q5TGU0 170 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 METTL11BQ5VVY1 283 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 RESP18Q5W5W9 173 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 TPGS2Q68CL5 300 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 TMEM215Q68D42 235 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SLC8B1Q6J4K2 584 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 PMF1Q6P1K2 205 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CCDC73Q6ZRK6 1079 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 ERN2Q76MJ5 926 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 SCD5Q86SK9 330 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 METTL23Q86XA0 190 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 BBS7Q8IWZ6 715 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CCDC65Q8IXS2 484 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 ZNF100Q8IYN0 542 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 MCOLN2Q8IZK6 566 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CMTM8Q8IZV2 173 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 NUP93Q8N1F7 819 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 THEM5Q8N1Q8 247 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 IQUBQ8NA54 791 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 RFESDQ8TAC1 157 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 WFDC5Q8TCV5 224 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SLC2A14Q8TDB8 520 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CKAP2Q8WWK9 683 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 PRCCQ92733 491 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 KLK6Q92876 244 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SMARCD2Q92925 531 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SNX21Q969T3 373 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 PSMG2Q969U7 264 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CLDN23Q96B33 292 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CCDC51Q96ER9 411 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 ZNF396Q96N95 335 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 IL4I1Q96RQ9 567 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 PKMYT1Q99640 499 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SSX3Q99909 188 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 P2RY13Q9BPV8 354 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 ACBD6Q9BR61 282 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 ATG101Q9BSB4 218 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 INPP5KQ9BT40 448 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 MED10Q9BTT4 135 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 TXLNGYQ9BZA5 131 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 ING2Q9H160 280 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CARD9Q9H257 536 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 ECT2Q9H8V3 914 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 GDF3Q9NR23 364 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 AGPAT3Q9NRZ7 376 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 FAM212BQ9NTI7 297 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 DMAC2Q9NW81 257 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CHCHD3Q9NX63 227 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 COX16Q9P0S2 106 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 GCNT4Q9P109 453 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 GIMAP2Q9UG22 337 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SLC2A6Q9UGQ3 507 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CYTH4Q9UIA0 394 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 XPO7Q9UIA9 1087 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 EMCNQ9ULC0 261 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 UBQLN1Q9UMX0 589 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 KIF3AQ9Y496 699 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CELSR1Q9NYQ6 3014 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 UNC13CQ8NB66 2214 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 UTP20O75691 2785 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 KMT2EQ8IZD2 1858 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 PTPRDP23468 1912 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 PLXNB3Q9ULL4 1909 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 NCOR2Q9Y618 2525 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CCDC88CQ9P219 2028 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CHD8Q9HCK8 2581 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 SPTBP11277 2137 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 RP1P56715 2156 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 AHCTF1Q8WYP5 2266 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 GVINP1Q7Z2Y8 2422 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 MAP1BP46821 2468 aaKnown RBP1.04□□□□□ -2.24
SMG1-212ENST00000566328 TRAV19A0A0A6YYK7 116 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 PVALEFA0A1B0GWK0 134 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 TMX2-CTNND1H3BSU7 103 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 K7ERQ8 282 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 LAD1O00515 517 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 CHADO15335 359 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 P4HA2O15460 535 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 KINO60870 393 aaKnown RBP1.04□□□□□ -2.24
SMG1-212ENST00000566328 LYPLA1O75608 230 aaPredicted RBP1.04□□□□□ -2.24
SMG1-212ENST00000566328 NOL4O94818 638 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 ADCY5O95622 1261 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 TNNC2P02585 160 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 SEMG1P04279 462 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 PRB1P04280 392 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 VIMP08670 466 aaKnown RBP1.04□□□□□ -2.24
SMG1-212ENST00000566328 CCDC192P0DO97 292 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 ZNF18P17022 549 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 GAP43P17677 238 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 MUTP22033 750 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 WARSP23381 471 aaKnown RBP1.04□□□□□ -2.24
SMG1-212ENST00000566328 MAT2AP31153 395 aaKnown RBP1.04□□□□□ -2.24
SMG1-212ENST00000566328 GTF2H1P32780 548 aa1.04□□□□□ -2.24
SMG1-212ENST00000566328 CD70P32970 193 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms