RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 FAM220AQ7Z4H9 259 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 LRRC56Q8IYG6 542 aaPredicted RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 MTMR14Q8NCE2 650 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SLC25A28Q96A46 364 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SLC41A2Q96JW4 573 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 FXYD6Q9H0Q3 95 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 THSD1Q9NS62 852 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 MBD1Q9UIS9 605 aaPredicted RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 USP21Q9UK80 565 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 LSM5Q9Y4Y9 91 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 RAI2Q9Y5P3 530 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 GALR3O60755 368 aaPredicted RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 SLC25A12O75746 678 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 F11P03951 625 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 OR8U8P0C7N1 319 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 UBCP0CG48 685 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 XCR1P46094 333 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 CXADRP78310 365 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 PRR5P85299 388 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SLC14A1Q13336 389 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 HTR4Q13639 388 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 DOC2AQ14183 400 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 PRAMEF13Q5VWM6 474 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 USP30Q70CQ3 517 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 KLBQ86Z14 1044 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 FBXO22Q8NEZ5 403 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 OR1S2Q8NGQ3 325 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SLC25A32Q9H2D1 315 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 LIN7CQ9NUP9 197 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 METTL1Q9UBP6 276 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 NEU3Q9UQ49 428 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 PTCH2Q9Y6C5 1203 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 UBE2QL1A1L167 161 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 OR2AT4A6NND4 320 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 HCRTO43612 131 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ASGR2P07307 311 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 PRPH2P23942 346 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 FAUP35544 74 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 CXCR3P49682 368 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 TNFRSF17Q02223 184 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 TIGD5Q53EQ6 642 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 CNKSR3Q6P9H4 555 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 VITQ6UXI7 678 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 LRRN1Q6UXK5 716 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 DCXRQ7Z4W1 244 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 NLGN2Q8NFZ4 835 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 HUS1BQ8NHY5 278 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 BRI3BPQ8WY22 251 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 GAB2Q9UQC2 676 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 TRAPPC13A5PLN9 417 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 E7EQ34 232 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 PCDH7O60245 1069 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 FKTNO75072 461 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ADH1CP00326 375 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ATXN1LP0C7T5 689 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 OSMP13725 252 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 TYMPP19971 482 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 CNR2P34972 360 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 PPIAP62937 165 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 MRPL49Q13405 166 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 SLC8B1Q6J4K2 584 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 NKAPQ8N5F7 415 aaKnown RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 GPBAR1Q8TDU6 330 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 MEGF10Q96KG7 1140 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 CCDC3Q9BQI4 270 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 MGME1Q9BQP7 344 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 CA10Q9NS85 328 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 NUDT15Q9NV35 164 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 PIAS3Q9Y6X2 628 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SCN9AQ15858 1988 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 GRXCR1A8MXD5 290 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 CLDN4O14493 209 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 IMPA2O14732 288 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SIGLEC5O15389 551 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ZNF749O43361 778 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 IFNA21P01568 189 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ANKRD34CP0C6C1 535 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 AMD1P17707 334 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 TLX1P31314 330 aaPredicted RBP2.72□□□□□ -1.97
CHD9-218ENST00000566029 CEACAM6P40199 344 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 PMELP40967 661 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 CCR6P51684 374 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 HTRA3P83110 453 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SIGLEC14Q08ET2 396 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 CSRP2Q16527 193 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 UQCC3Q6UW78 93 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 OR6V1Q8N148 313 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 GPC2Q8N158 579 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 C10orf126Q8N4M7 172 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 OR2AP1Q8NGE2 309 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 OR4A4PQ8NGN8 299 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SDF2Q99470 211 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 MESP1Q9BRJ9 268 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 NTMT1Q9BV86 223 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ST6GALNAC5Q9BVH7 336 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 FNDC11Q9BVV2 318 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 EGLN3Q9H6Z9 239 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 C19orf12Q9NSK7 152 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 ITGB4P16144 1822 aa2.72□□□□□ -1.97
CHD9-218ENST00000566029 SMIM30A4D0T7 59 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms