RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 TRAPPC4Q9Y296 219 aa18.85■□□□□ 0.61
SHCBP1-205ENST00000566016 A0A1B0GWA3 101 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 A0A1W2PNV4 684 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 TMEM72A0PK05 275 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 M0R3H8 397 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 CXCR6O00574 342 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 TNFSF13O75888 250 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 PNMTP11086 282 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 HSD17B1P14061 328 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 TFF3Q07654 80 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 FOXF2Q12947 444 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 RNPS1Q15287 305 aaKnown RBP18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 FXNQ16595 210 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 FBXL19-AS1Q494R0 122 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 LRRC23Q53EV4 343 aaPredicted RBP18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 CYBRD1Q53TN4 286 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 SAMD4BQ5PRF9 694 aaKnown RBP18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 GTF2IRD2BQ6EKJ0 949 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 ULK3Q6PHR2 472 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 TRPM8Q7Z2W7 1104 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 GTF2IRD2Q86UP8 949 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 SLC43A2Q8N370 569 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 OR6T1Q8NGN1 323 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 GMPPAQ96IJ6 420 aaPredicted RBP18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 WFDC6Q9BQY6 131 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 POTEKPQ9BYX7 375 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 OR11A1Q9GZK7 315 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 TMEM27Q9HBJ8 222 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 ADA2Q9NZK5 511 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 GMPR2Q9P2T1 348 aaKnown RBP18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 A0A0B4J2E0 115 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 A0A1B0GX12 115 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 FAM90A27PA6NNH2 459 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 A8MVM7 634 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 SULT2B1O00204 365 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 TPST2O60704 377 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 NPIPB7O75200 414 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 CPOXP36551 454 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 SLC25A3Q00325 362 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 ALG10BQ5I7T1 473 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 ZNF613Q6PF04 617 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 STK35Q8TDR2 534 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 PIGMQ9H3S5 423 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 JKAMPQ9P055 326 aa18.84■□□□□ 0.61
SHCBP1-205ENST00000566016 PRSS44E7EML9 344 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 GSTA4O15217 222 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 SS18L1O75177 396 aaPredicted RBP18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 GGT1P19440 569 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 ASCL1P50553 236 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 AGFG1P52594 562 aaKnown RBP18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 SELENOWP63302 87 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 MXRA7P84157 204 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 OR1Q1Q15612 314 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 NPTX1Q15818 432 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 C5orf46Q6UWT4 87 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 FCRLAQ7L513 359 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 FAM214BQ7L5A3 538 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 LZICQ8WZA0 190 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 SLC38A4Q969I6 547 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 ZHX1-C8orf76Q96EF9 292 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 SLC47A1Q96FL8 570 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 MCHR1Q99705 422 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 UCK2Q9BZX2 261 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 ADPRHL2Q9NX46 363 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 PACSIN3Q9UKS6 424 aa18.83■□□□□ 0.6
SHCBP1-205ENST00000566016 ZC3H12DA2A288 527 aaKnown RBP18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 ELOA3DA6NLF2 546 aaPredicted RBP18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 SMAD9O15198 467 aaKnown RBP18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 T-ENOLP0DO92 83 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 CCNA2P20248 432 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 ENPP1P22413 925 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 KIR2DL2P43627 348 aaPredicted RBP18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 ELOA3BQ3SY89 546 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 PPP4R4Q6NUP7 873 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 DEFB107AQ8IZN7 70 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 ARHGAP24Q8N264 748 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 ACBD4Q8NC06 268 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 RBM15BQ8NDT2 890 aaKnown RBP18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 ELOA3Q8NG57 546 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 OR4D11Q8NGI4 311 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 TACO1Q9BSH4 297 aaKnown RBP18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 POLR2J2Q9GZM3 115 aaKnown RBP18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 POLR2J3Q9H1A7 115 aaKnown RBP18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 SELENONQ9NZV5 590 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 CD300AQ9UGN4 299 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 SH3GLB1Q9Y371 365 aa18.82■□□□□ 0.6
SHCBP1-205ENST00000566016 FREM1Q5H8C1 2179 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 CELSR2Q9HCU4 2923 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 NKX2-6A6NCS4 301 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 B2RBV5 119 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 EIF1BO60739 113 aaKnown RBP18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 CYTIPO60759 359 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 PLGP00747 810 aaPredicted RBP18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 IDUAP35475 653 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 SLC35A1P78382 337 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 H3F3AP84243 136 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 ABLIM2Q6H8Q1 611 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 CARM1Q86X55 608 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 ABHD3Q8WU67 409 aa18.81■□□□□ 0.6
SHCBP1-205ENST00000566016 ROBO4Q8WZ75 1007 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms