RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 FAM234BA2RU67 622 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 AGAP5A6NIR3 686 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ELOA3DA6NLF2 546 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 CCT8L1PA6NM43 557 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 GPR171O14626 319 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 BIRC5O15392 142 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 MRPL33O75394 65 aaKnown RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ERLIN1O75477 346 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 CPSF4O95639 269 aaKnown RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 TP53P04637 393 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 SERPINE1P05121 402 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 CHRM4P08173 479 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ALDOCP09972 364 aaKnown RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 MYZAPP0CAP1 466 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 DHRS4L1P0CG22 281 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 IL12AP29459 219 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 RPL14P50914 215 aaKnown RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ZNF83P51522 516 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 OR2B6P58173 313 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 SLC25A3Q00325 362 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 SLC17A1Q14916 467 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 MAPK11Q15759 364 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 SYPL1Q16563 259 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 NRF1Q16656 503 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ELOA3BQ3SY89 546 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 TSPO2Q5TGU0 170 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 OR7E24Q6IFN5 339 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 HMBOX1Q6NT76 420 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 TMEM108Q6UXF1 575 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 UBE2J2Q8N2K1 259 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 MREGQ8N565 214 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ARFGAP2Q8N6H7 521 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ANKFN1Q8N957 763 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ZIC4Q8N9L1 334 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ELOA3Q8NG57 546 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 OR52E4Q8NGH9 312 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ZNF563Q8TA94 476 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 PIGXQ8TBF5 258 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 HTRA1Q92743 480 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 HS6ST2Q96MM7 605 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 CCDC115Q96NT0 180 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 TRNT1Q96Q11 434 aaKnown RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 SLC35A5Q9BS91 424 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ADAM19Q9H013 955 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 ALG2Q9H553 416 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 YAE1D1Q9NRH1 226 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 SLC7A10Q9NS82 523 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 MARCOQ9UEW3 520 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 BTNL2Q9UIR0 455 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 OSGIN1Q9UJX0 560 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 TMED7Q9Y3B3 224 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 RAP2CQ9Y3L5 183 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 FLVCR1Q9Y5Y0 555 aa7.53□□□□□ -1.2
CAPN3-213ENST00000565173 SPIN1Q9Y657 262 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-213ENST00000565173 YLPM1P49750 1951 aaKnown RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 ZC3H12DA2A288 527 aaKnown RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 CCDC154A6NI56 674 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 A8MV72 311 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 E9PBE3 544 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 H7C417 338 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 M0R1B8 84 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 FAAHO00519 579 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 ZNF208O43345 1280 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 EIF1BO60739 113 aaKnown RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 LBPP18428 481 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 CCNA2P20248 432 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 RPS4Y1P22090 263 aaKnown RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 CHI3L1P36222 383 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 CDKN2CP42773 168 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 SLC1A3P43003 542 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 MAGEA8P43361 318 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 HTR3AP46098 478 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 SLC1A6P48664 564 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 KHKP50053 298 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 DSCR9P59020 149 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 UFM1P61960 85 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 SLC35A1P78382 337 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 LOXL1Q08397 574 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 MST1LQ2TV78 715 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 TMEM249Q2WGJ8 235 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 FAM174BQ3ZCQ3 159 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 GPAT3Q53EU6 434 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 TNFAIP8L3Q5GJ75 292 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 COX20Q5RI15 118 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 C6orf52Q5T4I8 152 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 OGFOD2Q6N063 350 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 SLC22A25Q6T423 547 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 KLHL17Q6TDP4 642 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 LRRC74BQ6ZQY2 392 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 RNF130Q86XS8 419 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 CMIPQ8IY22 773 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 LRRC34Q8IZ02 419 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 MUC15Q8N387 334 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 ZNF525Q8N782 197 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 VPS37AQ8NEZ2 397 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 NANOS1Q8WY41 292 aaKnown RBP7.52□□□□□ -1.21
CAPN3-213ENST00000565173 ZHX1-C8orf76Q96EF9 292 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 BOD1Q96IK1 185 aa7.52□□□□□ -1.21
CAPN3-213ENST00000565173 ADAD1Q96M93 576 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms