RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 HMX1Q9NP08 348 aaPredicted RBP18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MED17Q9NVC6 651 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ADAM18Q9Y3Q7 739 aa18.92■□□□□ 0.62
MAP1LC3B-206ENST00000564844 C4orf47A7E2U8 309 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 EGFP01133 1207 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SLC35G4P0C7Q5 338 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 LAMP2P13473 410 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 UGT2B7P16662 529 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 NRG3P56975 720 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 H2BFSP57053 126 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SREBF2Q12772 1141 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TMEM44Q2T9K0 475 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TMEM69Q5SWH9 247 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MRPL2Q5T653 305 aaKnown RBP18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 METTL11BQ5VVY1 283 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 DMKNQ6E0U4 476 aaPredicted RBP18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TMUB2Q71RG4 321 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR4D10Q8NGI6 311 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 NXPE3Q969Y0 559 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MS4A6EQ96DS6 147 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 DEFB118Q96PH6 123 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 DPEP2Q9H4A9 486 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 A0A1B0GTH9 108 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SLC22A31A6NKX4 558 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 GOSR2O14653 212 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CREBL2O60519 120 aaPredicted RBP18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MTRF1O75570 445 aaKnown RBP18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PLPP4Q5VZY2 271 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 HAVCR2Q8TDQ0 301 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 DVL3Q92997 716 aaPredicted RBP18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ACTR6Q9GZN1 396 aa18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZMAT5Q9UDW3 170 aaKnown RBP18.91■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SELENOFO60613 162 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 RP2O75695 350 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CXCL14O95715 111 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 S100A11P31949 105 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ZNF136P52737 540 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 LRRC37A5PQ49AS3 106 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 FNDC3BQ53EP0 1204 aaKnown RBP18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 STK35Q8TDR2 534 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 FCAMRQ8WWV6 532 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 RADILQ96JH8 1075 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PRDM7Q9NQW5 492 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CPNE7Q9UBL6 633 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 KRT33AO76009 404 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ACHEP22303 614 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SHC2P98077 582 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ATXN7L3Q14CW9 347 aaPredicted RBP18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 LHX8Q68G74 356 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 KCNK15Q9H427 330 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 IL21RQ9HBE5 538 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TMEM74BQ9NUR3 256 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SPHK1Q9NYA1 384 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ST6GALNAC2Q9UJ37 374 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MOKQ9UQ07 419 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 NPFFR2Q9Y5X5 522 aa18.9■□□□□ 0.62
MAP1LC3B-206ENST00000564844 CACNB4O00305 520 aaPredicted RBP18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 SYT5O00445 386 aa18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 RLN2P04090 185 aa18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 FBXO45P0C2W1 286 aa18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 ABHD17CQ6PCB6 329 aa18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 TMEM88Q6PEY1 159 aa18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 KREMEN2Q8NCW0 462 aa18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 OR2A1Q8NGT9 310 aa18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 INSM2Q96T92 566 aaPredicted RBP18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 NPDC1Q9NQX5 325 aaPredicted RBP18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 KIF25Q9UIL4 384 aa18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 MRTO4Q9UKD2 239 aaKnown RBP18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 PCDHGA9Q9Y5G4 932 aaKnown RBP18.89■□□□□ 0.62
MAP1LC3B-206ENST00000564844 H0YC42 278 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PIN1P1O15428 100 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ASGR2P07307 311 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SRMP19623 302 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NT5EP21589 574 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CDK2P24941 298 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 RPS27P42677 84 aaKnown RBP18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SEC61A1P61619 476 aaKnown RBP18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SORDQ00796 357 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ETFDHQ16134 617 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 OR7E24Q6IFN5 339 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 HDDC2Q7Z4H3 204 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SLC25A38Q96DW6 304 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GFI1Q99684 422 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ACTRT3Q9BYD9 372 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MRPS30Q9NP92 439 aaKnown RBP18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MEPEQ9NQ76 525 aaPredicted RBP18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 APOBEC3BQ9UH17 382 aaKnown RBP18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CA5BQ9Y2D0 317 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PCDH8O95206 1070 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 VSIG10L2P0DP72 767 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SIRPAP78324 504 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 BDH1Q02338 343 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 FAM199XQ6PEV8 388 aaPredicted RBP18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PELI2Q9HAT8 420 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CMC2Q9NRP2 79 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 KLHL9Q9P2J3 617 aa18.89■□□□□ 0.61
MAP1LC3B-206ENST00000564844 BET1O15155 118 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SC5DO75845 299 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GUCA2AQ02747 115 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms