RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 IQCF2Q8IXL9 164 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 ZNF595Q8IYB9 648 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 PIANPQ8IYJ0 282 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 LRRC25Q8N386 305 aaPredicted RBP4.9□□□□□ -1.63
TCF4-220ENST00000563824 GCSAMQ8N6F7 178 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 APCDD1LQ8NCL9 501 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 OR8K3Q8NH51 312 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 SLC44A1Q8WWI5 657 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 SMPDL3AQ92484 453 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 PROX1Q92786 737 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 P3H4Q92791 437 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 DNAJC1Q96KC8 554 aaKnown RBP4.9□□□□□ -1.63
TCF4-220ENST00000563824 CAPZA3Q96KX2 299 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 FOPNLQ96NB1 174 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 PPP1R2P1Q96PQ5 205 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 SEPHS2Q99611 448 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 FNDC11Q9BVV2 318 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 SF3B5Q9BWJ5 86 aaKnown RBP4.9□□□□□ -1.63
TCF4-220ENST00000563824 NAT10Q9H0A0 1025 aaKnown RBP4.9□□□□□ -1.63
TCF4-220ENST00000563824 GBA3Q9H227 469 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 GOLPH3Q9H4A6 298 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 YY1AP1Q9H869 796 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 XAB2Q9HCS7 855 aaKnown RBP4.9□□□□□ -1.63
TCF4-220ENST00000563824 HIF1ANQ9NWT6 349 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 STOX2Q9P2F5 926 aaPredicted RBP4.9□□□□□ -1.63
TCF4-220ENST00000563824 TBK1Q9UHD2 729 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 CIDEBQ9UHD4 219 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 FBXW2Q9UKT8 454 aa4.9□□□□□ -1.63
TCF4-220ENST00000563824 KIAA1549Q9HCM3 1950 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 hCG_1818297A0A087WSY0 165 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 C15orf38-AP3S2A0A0A6YYH1 394 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 TRBV11-1A0A0K0K1C0 115 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 A0A1W2PPV9 198 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 OR51F1A6NGY5 319 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 C16orf97H3BN30 126 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 B4GALT2O60909 372 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 ANXA9O76027 345 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 BAG2O95816 211 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 CSF3P09919 207 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 EEF1B2P24534 225 aaKnown RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 PSMB4P28070 264 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 LOXP28300 417 aaPredicted RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 HOXD3P31249 432 aaPredicted RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 RPA3P35244 121 aaPredicted RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 GCKP35557 465 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 ACVR1BP36896 505 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 RPL21P46778 160 aaKnown RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 MARCKSL1P49006 195 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 BMXP51813 675 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 NR0B1P51843 470 aaKnown RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 GEMP55040 296 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 UBASH3AP57075 661 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 RPS15AP62244 130 aaKnown RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 KCNJ2P63252 427 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 ACTG1P63261 375 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 TFDP2Q14188 446 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 ODF2Q5BJF6 829 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 ANKRD20A2Q5SQ80 823 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 ANKRD20A1Q5TYW2 823 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 ANKRD20A3Q5VUR7 823 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 C11orf88Q6PI97 169 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 CLEC2AQ6UVW9 174 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 TAS2R42Q7RTR8 314 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 LUZP2Q86TE4 346 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 NRACQ8N912 160 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 OR5L2Q8NGL0 311 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 THAP6Q8TBB0 222 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 SLC38A5Q8WUX1 472 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 IL17FQ96PD4 163 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 QKIQ96PU8 341 aaKnown RBP eCLIP4.89□□□□□ -1.639e-9■■■■□ 19.8
TCF4-220ENST00000563824 CSF3RQ99062 836 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 CHP1Q99653 195 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 GFI1Q99684 422 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 SLC25A33Q9BSK2 321 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 TMEM204Q9BSN7 226 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 CARD6Q9BX69 1037 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 FANCFQ9NPI8 374 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 KLHL28Q9NXS3 571 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 SMARCAL1Q9NZC9 954 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 CNIH4Q9P003 139 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 RCC2Q9P258 522 aaKnown RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 PTBP2Q9UKA9 531 aaKnown RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 RRP15Q9Y3B9 282 aaKnown RBP4.89□□□□□ -1.63
TCF4-220ENST00000563824 ATG4BQ9Y4P1 393 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 MMACHCQ9Y4U1 282 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 MALRD1Q5VYJ5 2156 aa4.89□□□□□ -1.63
TCF4-220ENST00000563824 FREM3P0C091 2139 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 A0A096LNT2 108 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 IGKV3D-11A0A0A0MRZ8 115 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 KRT87PA6NCN2 255 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 FRG2CA6NGY1 282 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 HACD1B0YJ81 288 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 SPOPO43791 374 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 OR1I1O60431 355 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 OR2J2O76002 312 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 OR6B1O95007 311 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 C1orf105O95561 183 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 ACTL6AO96019 429 aa4.88□□□□□ -1.63
TCF4-220ENST00000563824 ERGP11308 486 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms