RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 UQCRBP14927 111 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 SLC7A1P30825 629 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 CPA2P48052 419 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 CLK1P49759 484 aaKnown RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 DIO1P49895 249 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 NUDT2P50583 147 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 SLC7A2P52569 658 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 SIRPAP78324 504 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 H3F3AP84243 136 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 EGR4Q05215 589 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 LIPEQ05469 1076 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 BNIP2Q12982 314 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 SNTB1Q13884 538 aaKnown RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 VEZF1Q14119 521 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 NRF1Q16656 503 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 ZNF474Q6S9Z5 364 aaPredicted RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 C6orf89Q6UWU4 347 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 MEX3BQ6ZN04 569 aaKnown RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 FCRLAQ7L513 359 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 FAM214BQ7L5A3 538 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 PATL1Q86TB9 770 aaKnown RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 RBM45Q8IUH3 476 aaKnown RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 MICU2Q8IYU8 434 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 CADM2Q8N3J6 435 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 FITM2Q8N6M3 262 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 CNEP1R1Q8N9A8 125 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 RNASE6Q93091 150 aaKnown RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 CPNE4Q96A23 557 aaPredicted RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 CMTM5Q96DZ9 223 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 GMPPAQ96IJ6 420 aaPredicted RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 HOPXQ9BPY8 73 aaPredicted RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 OPN3Q9H1Y3 402 aaPredicted RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 PIGMQ9H3S5 423 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 ARMC7Q9H6L4 198 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 TIGARQ9NQ88 270 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 ABCD2Q9UBJ2 740 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 PACSIN3Q9UKS6 424 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 MCTS1Q9ULC4 181 aaKnown RBP7.62□□□□□ -1.19
UBR1-204ENST00000563239 TRAPPC4Q9Y296 219 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 HDGFL3Q9Y3E1 203 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 PDZD2O15018 2839 aa7.62□□□□□ -1.19
UBR1-204ENST00000563239 IGKV1D-42A0A075B6H8 117 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 A0A0B4J2E0 115 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 A0A1B0GWA3 101 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 A0A1B0GX12 115 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 ELOVL7A1L3X0 281 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 ENO4A6NNW6 628 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 ZNF716A6NP11 495 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 EEF1E1-BLOC1S5C9J1V9 151 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 SULT2B1O00204 365 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 MSTNO14793 375 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 EEF1E1O43324 174 aaKnown RBP7.61□□□□□ -1.19
UBR1-204ENST00000563239 HNRNPRO43390 633 aaKnown RBP7.61□□□□□ -1.19
UBR1-204ENST00000563239 CYTIPO60759 359 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 RAMP1O60894 148 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 PRKD3O94806 890 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 THY1P04216 161 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 FESP07332 822 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 TFPIP10646 304 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 CD8BP10966 210 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 CXCR1P25024 350 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 EDNRAP25101 427 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 FKBP2P26885 142 aaKnown RBP7.61□□□□□ -1.19
UBR1-204ENST00000563239 AGTR1P30556 359 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 KDELR2P33947 212 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 NTF4P34130 210 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 GSK3BP49841 420 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 MAP2K6P52564 334 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 PSME3P61289 254 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 COPZ1P61923 177 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 OR1Q1Q15612 314 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 INTS11Q5TA45 600 aaKnown RBP7.61□□□□□ -1.19
UBR1-204ENST00000563239 EEF1A1P5Q5VTE0 462 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 ABLIM2Q6H8Q1 611 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 PPP4R4Q6NUP7 873 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 ERICH5Q6P6B1 374 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 NUFIP2Q7Z417 695 aaKnown RBP7.61□□□□□ -1.19
UBR1-204ENST00000563239 ARPINQ7Z6K5 226 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 LUZP2Q86TE4 346 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 CCDC103Q8IW40 242 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 TUSC5Q8IXB3 177 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 ZNF610Q8N9Z0 462 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 BHLHE22Q8NFJ8 381 aaPredicted RBP7.61□□□□□ -1.19
UBR1-204ENST00000563239 OR2T12Q8NG77 320 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 OR52E4Q8NGH9 312 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 OR6T1Q8NGN1 323 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 MARVELD3Q96A59 401 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 LRRC37BQ96QE4 947 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 PSD2Q9BQI7 771 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 ZNF559Q9BR84 538 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 PTDSS2Q9BVG9 487 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 POTEKPQ9BYX7 375 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 PRRG4Q9BZD6 226 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 TRIM2Q9C040 744 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 C12orf10Q9HB07 376 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 CACYBPQ9HB71 228 aaKnown RBP7.61□□□□□ -1.19
UBR1-204ENST00000563239 PLSCR4Q9NRQ2 329 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 GLRX2Q9NS18 164 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 GALNT8Q9NY28 637 aa7.61□□□□□ -1.19
UBR1-204ENST00000563239 TMEM181Q9P2C4 612 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms