RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 EPYCQ99645 322 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 PIP5K1AQ99755 562 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 TUBA1CQ9BQE3 449 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 POTEKPQ9BYX7 375 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 YY1AP1Q9H869 796 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 TINAGQ9UJW2 476 aa16.92■□□□□ 0.3
RAB40C-207ENST00000563109 A0A0J9YW62 118 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 H0YC42 278 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 ADAMDEC1O15204 470 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 SEMA7AO75326 666 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 SYNGR4O95473 234 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 H1F0P07305 194 aaKnown RBP16.91■□□□□ 0.3
RAB40C-207ENST00000563109 STSP08842 583 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 CA7P43166 264 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 UQCRFS1P47985 274 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 ERFP50548 548 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 TPD52P55327 224 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-207ENST00000563109 CARD18P57730 90 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 SMIM11AP58511 58 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 SPIBQ01892 262 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 MYBPHQ13203 477 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 CTU2Q2VPK5 515 aaKnown RBP16.91■□□□□ 0.3
RAB40C-207ENST00000563109 ACSF3Q4G176 576 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-207ENST00000563109 C1orf140Q5VVS0 124 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 PPP4R4Q6NUP7 873 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 PIWIL3Q7Z3Z3 882 aaKnown RBP16.91■□□□□ 0.3
RAB40C-207ENST00000563109 DOLPP1Q86YN1 238 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 PRR7Q8TB68 274 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 CANT1Q8WVQ1 401 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 ZHX1-C8orf76Q96EF9 292 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 TRIB1Q96RU8 372 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 TMEM43Q9BTV4 400 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 RHCGQ9UBD6 479 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 MCTS1Q9ULC4 181 aaKnown RBP16.91■□□□□ 0.3
RAB40C-207ENST00000563109 MED12Q93074 2177 aa16.91■□□□□ 0.3
RAB40C-207ENST00000563109 KIAA1549Q9HCM3 1950 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 A0A1W2PNR3 127 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 ZC3H12DA2A288 527 aaKnown RBP16.9■□□□□ 0.3
RAB40C-207ENST00000563109 CLCA1A8K7I4 914 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 SULT2B1O00204 365 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 CXCL13O43927 109 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 DIRAS1O95057 198 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 LYPD3O95274 346 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 MT-ND1P03886 318 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 THY1P04216 161 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 RBM34P42696 430 aaKnown RBP16.9■□□□□ 0.3
RAB40C-207ENST00000563109 MAGEA2P43356 314 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 FOXD4Q12950 439 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-207ENST00000563109 EMC4Q5J8M3 183 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 C1QL3Q5VWW1 255 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 TMPPEQ6ZT21 453 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 P4HA3Q7Z4N8 544 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 PIK3C3Q8NEB9 887 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 OSTF1Q92882 214 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 CPNE4Q96A23 557 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-207ENST00000563109 ARL5BQ96KC2 179 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 HS6ST2Q96MM7 605 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 TAPBPLQ9BX59 468 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 ANKRD19PQ9H560 264 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 COQ10BQ9H8M1 238 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 TESMINQ9Y4I5 508 aa16.9■□□□□ 0.3
RAB40C-207ENST00000563109 TRAV36DV7A0A075B6V5 113 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 A0A1B0GUH1 482 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 SLC22A20A6NK97 555 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 FFAR1O14842 300 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 PMS2P2O95744 297 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 FCGR2AP12318 317 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 PTNP21246 168 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 GTF2E2P29084 291 aaKnown RBP16.89■□□□□ 0.29
RAB40C-207ENST00000563109 DIO1P49895 249 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 OR2B6P58173 313 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 CCNIQ14094 377 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 EIF2S3LQ2VIR3 472 aaKnown RBP16.89■□□□□ 0.29
RAB40C-207ENST00000563109 FGD3Q5JSP0 725 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 LINC00114Q6XXX2 140 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 B3GNT6Q6ZMB0 384 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 C3P1Q6ZMU1 363 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 WDR88Q6ZMY6 472 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 TSEN54Q7Z6J9 526 aaKnown RBP16.89■□□□□ 0.29
RAB40C-207ENST00000563109 C10orf67Q8IYJ2 551 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 DNAJA3Q96EY1 480 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 ZNF845Q96IR2 970 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-207ENST00000563109 PRSS27Q9BQR3 290 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 CHID1Q9BWS9 393 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 PRRG4Q9BZD6 226 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 SLC19A3Q9BZV2 496 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 CALHM2Q9HA72 323 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 NMNAT1Q9HAN9 279 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-207ENST00000563109 TRAPPC4Q9Y296 219 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 ZNF175Q9Y473 711 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 MPDZO75970 2070 aa16.89■□□□□ 0.29
RAB40C-207ENST00000563109 IGKV1D-42A0A075B6H8 117 aa16.88■□□□□ 0.29
RAB40C-207ENST00000563109 A0A1W2PRQ8 180 aa16.88■□□□□ 0.29
RAB40C-207ENST00000563109 CD8B2A6NJW9 211 aa16.88■□□□□ 0.29
RAB40C-207ENST00000563109 KPNA4O00629 521 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-207ENST00000563109 DNPH1O43598 174 aa16.88■□□□□ 0.29
RAB40C-207ENST00000563109 OR2T1O43869 369 aa16.88■□□□□ 0.29
RAB40C-207ENST00000563109 NPIPB7O75200 414 aa16.88■□□□□ 0.29
RAB40C-207ENST00000563109 PRSS23O95084 383 aa16.88■□□□□ 0.29
RAB40C-207ENST00000563109 GADD45GO95257 159 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms