RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 PCYOX1LQ8NBM8 494 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 LINC01560Q8TB33 94 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 GMPPAQ96IJ6 420 aaPredicted RBP12.38□□□□□ -0.43
TPM1-230ENST00000561266 ZNF607Q96SK3 696 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 ARHGDIGQ99819 225 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 PSD2Q9BQI7 771 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
TPM1-230ENST00000561266 PIGMQ9H3S5 423 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 GID8Q9NWU2 228 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 PAQR5Q9NXK6 330 aaPredicted RBP12.38□□□□□ -0.43
TPM1-230ENST00000561266 NOTCH2Q04721 2471 aa12.38□□□□□ -0.43
TPM1-230ENST00000561266 ANKHD1Q8IWZ3 2542 aaKnown RBP12.38□□□□□ -0.43
TPM1-230ENST00000561266 IGKV1D-42A0A075B6H8 117 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 A0A1B0GWA3 101 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 MSTNO14793 375 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 ZNF208O43345 1280 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 CYTIPO60759 359 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 LYPD3O95274 346 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 PMS2P2O95744 297 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 THY1P04216 161 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 FCGR2AP12318 317 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 PTNP21246 168 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 CCKARP32238 428 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 HTR3AP46098 478 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 SLC7A2P52569 658 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 OR2B6P58173 313 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 ZSWIM7Q19AV6 140 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.37□□□□□ -0.43
TPM1-230ENST00000561266 OR6T1Q8NGN1 323 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 SLC25A43Q8WUT9 341 aaPredicted RBP12.37□□□□□ -0.43
TPM1-230ENST00000561266 SLC35B4Q969S0 331 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 REXO5Q96IC2 774 aaKnown RBP12.37□□□□□ -0.43
TPM1-230ENST00000561266 SPATA5L1Q9BVQ7 753 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 C12orf49Q9H741 205 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 PLSCR4Q9NRQ2 329 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 CRIM1Q9NZV1 1036 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 KLHL13Q9P2N7 655 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 ARL2BPQ9Y2Y0 163 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 HDGFL3Q9Y3E1 203 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 ALPK2Q86TB3 2170 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 HRNRQ86YZ3 2850 aaPredicted RBP12.37□□□□□ -0.43
TPM1-230ENST00000561266 PDZD2O15018 2839 aa12.37□□□□□ -0.43
TPM1-230ENST00000561266 ABCA4P78363 2273 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 CSMD2Q7Z408 3487 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 ZNF716A6NP11 495 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 FAM220BPB1ANY3 271 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 SHOX2O60902 331 aaPredicted RBP12.36□□□□□ -0.43
TPM1-230ENST00000561266 SERPINB7O75635 380 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 PRKD3O94806 890 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 CD8BP10966 210 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 FPR1P21462 350 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 FUT4P22083 530 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 CXCR1P25024 350 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 CPOXP36551 454 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 NUDT2P50583 147 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 H3F3AP84243 136 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 LIPEQ05469 1076 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 CEACAM7Q14002 265 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 OR1Q1Q15612 314 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 ABLIM2Q6H8Q1 611 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 HACD2Q6Y1H2 254 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 WDR88Q6ZMY6 472 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 MICU2Q8IYU8 434 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 LSMEM1Q8N8F7 131 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 OR52E4Q8NGH9 312 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 OR6K3Q8NGY3 331 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 VANGL1Q8TAA9 524 aaPredicted RBP12.36□□□□□ -0.43
TPM1-230ENST00000561266 SH3GL1Q99961 368 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 PTDSS2Q9BVG9 487 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 EFCAB1Q9HAE3 211 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 TIGARQ9NQ88 270 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 TMEM181Q9P2C4 612 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 PROCRQ9UNN8 238 aa12.36□□□□□ -0.43
TPM1-230ENST00000561266 POLQO75417 2590 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 MAST4O15021 2626 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 A0A0B4J2E0 115 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 A0A1B0GX12 115 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 PRORSD1PA6NEY8 169 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 LIPT2A6NK58 231 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 PLGP00747 810 aaPredicted RBP12.35□□□□□ -0.43
TPM1-230ENST00000561266 PRDX6P30041 224 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 CLK1P49759 484 aaKnown RBP12.35□□□□□ -0.43
TPM1-230ENST00000561266 P2RY4P51582 365 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 CTBP2P56545 445 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 RGS8P57771 180 aaPredicted RBP12.35□□□□□ -0.43
TPM1-230ENST00000561266 PSME3P61289 254 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 COPZ1P61923 177 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 LTBQ06643 244 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 RASGEF1BQ0VAM2 473 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 VEZF1Q14119 521 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 EXOC3L2Q2M3D2 409 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 C6orf89Q6UWU4 347 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 TFAP2EQ6VUC0 442 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 PATL1Q86TB9 770 aaKnown RBP12.35□□□□□ -0.43
TPM1-230ENST00000561266 TMEM99Q8N816 258 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 OR2T12Q8NG77 320 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 DDIT4LQ96D03 193 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 KTI12Q96EK9 354 aaPredicted RBP12.35□□□□□ -0.43
TPM1-230ENST00000561266 MCHR1Q99705 422 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 POTEKPQ9BYX7 375 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms