RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MMP11P24347 488 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 STAT5AP42229 794 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 DEFA5Q01523 94 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 MC2RQ01718 297 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC9A5Q14940 896 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 MRM1Q6IN84 353 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 IL20RBQ6UXL0 311 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 GLDNQ6ZMI3 551 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 Q6ZTK2 550 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 LHFPL3Q86UP9 236 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 EID2Q8N6I1 236 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 MFSD9Q8NBP5 474 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 PXT1Q8NFP0 134 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 SMIM4Q8WVI0 70 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 ASB13Q8WXK3 278 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 INTS12Q96CB8 462 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC35G5Q96KT7 338 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 CMTM3Q96MX0 182 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 ZNF649Q9BS31 505 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 TEX12Q9BXU0 123 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 CHIAQ9BZP6 476 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 OR51I1Q9H343 314 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 SYNPO2LQ9H987 977 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 MED17Q9NVC6 651 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 ABRACLQ9P1F3 81 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 NPFFR2Q9Y5X5 522 aa12.91□□□□□ -0.34
RABGGTA-220ENST00000560998 A0A1W2PR48 441 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 PRAMEF27A3QJZ7 478 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 POM121BA6NF01 834 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 ANKRD61A6NGH8 418 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 POM121CA8CG34 1229 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 CREBL2O60519 120 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 KDM4BO94953 1096 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 WNT1P04628 370 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 IL5P05113 134 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 TYRP1P17643 537 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 CMPK1P30085 196 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 NTSP30990 170 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 CTHP32929 405 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 CCR9P51686 369 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 NCBP2P52298 156 aaKnown RBP eCLIP12.9□□□□□ -0.341e-10■■■□□ 14.8
RABGGTA-220ENST00000560998 CLDN2P57739 230 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 DGCR2P98153 550 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 ZNF425Q6IV72 752 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 PODNL1Q6PEZ8 512 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 UQCC3Q6UW78 93 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 MTSS1LQ765P7 747 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D19Q8N5T2 526 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 ACOT4Q8N9L9 421 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 OR2L5Q8NG80 312 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 OR11G2Q8NGC1 345 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 OR4K5Q8NGD3 323 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 OR51Q1Q8NH59 317 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC22A8Q8TCC7 542 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 OR1E3Q8WZA6 343 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 BBS4Q96RK4 519 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 ZNF607Q96SK3 696 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 UTP23Q9BRU9 249 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 P2RX2Q9UBL9 471 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D29Q9UFV1 150 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 ENTPD4Q9Y227 616 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 COLEC10Q9Y6Z7 277 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 F5P12259 2224 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC9B1P1A6NJY1 282 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 GLOD5A6NK44 160 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 PGRMC2O15173 223 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 SEMA7AO75326 666 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 EML2O95834 649 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 MECP2P51608 486 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 ARFIP1P53367 373 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 PSMA6P60900 246 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 DLX2Q07687 328 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 RAB30Q15771 203 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 SYPL1Q16563 259 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 SFRP5Q5T4F7 317 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 B3GLCTQ6Y288 498 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 MEIOBQ8N635 442 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 ZCCHC3Q9NUD5 404 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 ATG4BQ9Y4P1 393 aa12.9□□□□□ -0.34
RABGGTA-220ENST00000560998 A0A0G2JK05 382 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF749O43361 778 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 GATCO43716 136 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 AIFM1O95831 613 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 HTR1FP30939 366 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 IFNGR2P38484 337 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 RFC3P40938 356 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 KHKP50053 298 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 INSL4Q14641 139 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF626Q68DY1 528 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 TMEM64Q6YI46 380 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 CXXC5Q7LFL8 322 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 SZRD1Q7Z422 152 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 KLBQ86Z14 1044 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 TEX19Q8NA77 164 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 OR4D11Q8NGI4 311 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 OR5D16Q8NGK9 328 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 OR6K3Q8NGY3 331 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 SFXN5Q8TD22 340 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms