RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CCDC153Q494R4 210 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 WDR93Q6P2C0 686 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 BHLHB9Q6PI77 547 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 EIF3MQ7L2H7 374 aaKnown RBP9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 OLIG3Q7RTU3 272 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 C17orf78Q8N4C9 275 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 WDR31Q8NA23 367 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 AGR3Q8TD06 166 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 SFXN5Q8TD22 340 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 MOAP1Q96BY2 351 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 ARL5BQ96KC2 179 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC35G5Q96KT7 338 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 MUS81Q96NY9 551 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 SDF2Q99470 211 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 PRPF18Q99633 342 aaKnown RBP9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 NAA11Q9BSU3 229 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 C1orf50Q9BV19 199 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR11A1Q9GZK7 315 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 RAB1BQ9H0U4 201 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC7A10Q9NS82 523 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 ACER3Q9NUN7 267 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 PARPBPQ9NWS1 579 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 TMEFF2Q9UIK5 374 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 EMCNQ9ULC0 261 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC9A8Q9Y2E8 581 aa9.17□□□□□ -0.94
CDC42BPB-207ENST00000560492 A0A1W2PPM1 405 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 SMIM23A6NLE4 172 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 NPIPB8E9PQR5 432 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 NPIPB9F8W1W9 429 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 LSM1O15116 133 aaKnown RBP9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 PEX11AO75192 247 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 CRYAAP02489 173 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 PROCP04070 461 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 ABHD2P08910 425 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 CFPP27918 469 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 SERPINF1P36955 418 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC1A3P43003 542 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 CCT5P48643 541 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 DNAJB13P59910 316 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 UBE2NP61088 152 aaKnown RBP9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 CCNIQ14094 377 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 PGS1Q32NB8 556 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 FAM153CQ494X1 144 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 HIKESHIQ53FT3 197 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 EXOSC6Q5RKV6 272 aaKnown RBP9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 ATAD3BQ5T9A4 648 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 TSPO2Q5TGU0 170 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 HMGN2P46Q86SG4 172 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 MEX3DQ86XN8 651 aaKnown RBP9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 C1orf162Q8NEQ5 155 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 TWIST2Q8WVJ9 160 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 FCRL1Q96LA6 429 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 SNX18Q96RF0 628 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 SOX7Q9BT81 388 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 NMUR2Q9GZQ4 415 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 EXD2Q9NVH0 621 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 GPATCH2Q9NW75 528 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 GIMAP2Q9UG22 337 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 ATP6V1HQ9UI12 483 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 DCTN4Q9UJW0 460 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 RAB21Q9UL25 225 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 HDGFL3Q9Y3E1 203 aa9.16□□□□□ -0.94
CDC42BPB-207ENST00000560492 CENPVL1A0A0U1RR11 272 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 RNF103-CHMP3A0A140T963 221 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 SH3PXD2BA1X283 911 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 DUXAA6NLW8 204 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 TMEM233B4DJY2 109 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 B9A039 149 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 COPEO14579 308 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 PIP5K1BO14986 540 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 RIPK2O43353 540 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 PLIN3O60664 434 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 RGS9O75916 674 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 AK1P00568 194 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR4A8P0C604 315 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 DAOP14920 347 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 MPGP29372 298 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 NTF4P34130 210 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 HPCAP84074 193 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 PTGR1Q14914 329 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 SWI5Q1ZZU3 235 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 ATP6AP1LQ52LC2 224 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 SHQ1Q6PI26 577 aaKnown RBP9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 TRMT10CQ7L0Y3 403 aaKnown RBP9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 AAED1Q7RTV5 226 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 GRINAQ7Z429 371 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 ABHD12BQ7Z5M8 362 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 GPAT4Q86UL3 456 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 GSPT2Q8IYD1 628 aaKnown RBP9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 CLEC4FQ8N1N0 589 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 ARFGAP2Q8N6H7 521 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 C3orf56Q8N813 242 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 LINC01356Q8N9X3 169 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 FNDC5Q8NAU1 212 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 ZNF511Q8NB15 262 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 DDIT4LQ96D03 193 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 PPP3R2Q96LZ3 170 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC38A2Q96QD8 506 aa9.15□□□□□ -0.94
CDC42BPB-207ENST00000560492 BHLHE41Q9C0J9 482 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms