RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 SLC1A3P43003 542 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 RNF144AP50876 292 aaPredicted RBP10.67□□□□□ -0.7
LDLR-212ENST00000560467 HMGA2P52926 109 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 RAD23AP54725 363 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 HOXC5Q00444 222 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 EPS8Q12929 822 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 MICAQ29983 383 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 RFX4Q33E94 735 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 ELOA3BQ3SY89 546 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 ALG10BQ5I7T1 473 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 OGFRL1Q5TC84 451 aaPredicted RBP10.67□□□□□ -0.7
LDLR-212ENST00000560467 TMEM81Q6P7N7 255 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 TTC33Q6PID6 262 aaPredicted RBP10.67□□□□□ -0.7
LDLR-212ENST00000560467 RBM45Q8IUH3 476 aaKnown RBP10.67□□□□□ -0.7
LDLR-212ENST00000560467 DMRTC2Q8IXT2 367 aaPredicted RBP10.67□□□□□ -0.7
LDLR-212ENST00000560467 RNF113BQ8IZP6 322 aaKnown RBP10.67□□□□□ -0.7
LDLR-212ENST00000560467 LILRA2Q8N149 483 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 GALNT4Q8N4A0 578 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 CBR4Q8N4T8 237 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 LSMEM1Q8N8F7 131 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 ELOA3Q8NG57 546 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 OR1J4Q8NGS1 313 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 LILRB4Q8NHJ6 448 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 MAGEE2Q8TD90 523 aaPredicted RBP10.67□□□□□ -0.7
LDLR-212ENST00000560467 PAQR8Q8TEZ7 354 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 ASB5Q8WWX0 329 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 DNAJC9Q8WXX5 260 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 JSRP1Q96MG2 331 aaPredicted RBP10.67□□□□□ -0.7
LDLR-212ENST00000560467 NODALQ96S42 347 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 CIB1Q99828 191 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 ANGPTL4Q9BY76 406 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 SERINC1Q9NRX5 453 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 RHCGQ9UBD6 479 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 BOKQ9UMX3 212 aaPredicted RBP10.67□□□□□ -0.7
LDLR-212ENST00000560467 WIF1Q9Y5W5 379 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 DNHD1Q96M86 4753 aa10.67□□□□□ -0.7
LDLR-212ENST00000560467 A0A087WZY1 265 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 CENPVL1A0A0U1RR11 272 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 H0YJX3 145 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 TPST2O60704 377 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 PRSS23O95084 383 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 HPRP00739 348 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 HOXB4P17483 251 aaPredicted RBP10.66□□□□□ -0.7
LDLR-212ENST00000560467 CNR1P21554 472 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 FKBP2P26885 142 aaKnown RBP10.66□□□□□ -0.7
LDLR-212ENST00000560467 EIF1P41567 113 aaKnown RBP10.66□□□□□ -0.7
LDLR-212ENST00000560467 ALDH3A2P51648 485 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 MAP2K6P52564 334 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 NUP107P57740 925 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 PMPCAQ10713 525 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 MYBPHQ13203 477 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 SKP2Q13309 424 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 NPTX1Q15818 432 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 EXOC3L2Q2M3D2 409 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 EMC4Q5J8M3 183 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 LPCAT4Q643R3 524 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 LYPD8Q6UX82 237 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 MDGA2Q7Z553 956 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 PLCZ1Q86YW0 608 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 PIGXQ8TBF5 258 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 ACOT11Q8WXI4 607 aaPredicted RBP10.66□□□□□ -0.7
LDLR-212ENST00000560467 RND1Q92730 232 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 TACO1Q9BSH4 297 aaKnown RBP10.66□□□□□ -0.7
LDLR-212ENST00000560467 TMUB1Q9BVT8 246 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 TEX12Q9BXU0 123 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 TP63Q9H3D4 680 aaPredicted RBP10.66□□□□□ -0.7
LDLR-212ENST00000560467 KCNJ16Q9NPI9 418 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 CTPS2Q9NRF8 586 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 ACER3Q9NUN7 267 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 FLRT3Q9NZU0 649 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 ACAD8Q9UKU7 415 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 SLC7A7Q9UM01 511 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 A4GNTQ9UNA3 340 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 MGAT4BQ9UQ53 548 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 TMEM5Q9Y2B1 443 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 MED31Q9Y3C7 131 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 LYVE1Q9Y5Y7 322 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 SPIN1Q9Y657 262 aaPredicted RBP10.66□□□□□ -0.7
LDLR-212ENST00000560467 CHCHD2Q9Y6H1 151 aaPredicted RBP10.66□□□□□ -0.7
LDLR-212ENST00000560467 ABCA4P78363 2273 aa10.66□□□□□ -0.7
LDLR-212ENST00000560467 INTS1Q8N201 2190 aaKnown RBP10.66□□□□□ -0.7
LDLR-212ENST00000560467 PRRC2AP48634 2157 aaKnown RBP10.65□□□□□ -0.7
LDLR-212ENST00000560467 A0A0G2JMM0 328 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 A0A1B0GWA3 101 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 A0A1W2PPB8 328 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 A0A1W2PRS3 328 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 PINLYPA6NC86 204 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 ARRDC5A6NEK1 342 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 FAM166BA8MTA8 275 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 KIR3DP1A8MWS1 328 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 J3KTA2 159 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 CHP2O43745 196 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 GMFGO60234 142 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 CBR3O75828 277 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 PRG2P13727 222 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 CD99P14209 185 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 GSTM3P21266 225 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 PEX2P28328 305 aa10.65□□□□□ -0.7
LDLR-212ENST00000560467 RBM34P42696 430 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms