RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 TOXO94900 526 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 PRSS23O95084 383 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 OR5F1O95221 314 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 TGM6O95932 706 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 GLI4P10075 376 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 TFPIP10646 304 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 IMPDH2P12268 514 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 SLC7A1P30825 629 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 PTGER4P35408 488 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 ADORA2A-AS1P86434 159 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 TRAP1Q12931 704 aaKnown RBP19.52■□□□□ 0.72
SNX1-210ENST00000560260 MYBPHQ13203 477 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 ELOA3BQ3SY89 546 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 MTX3Q5HYI7 312 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 SWT1Q5T5J6 900 aaKnown RBP19.52■□□□□ 0.72
SNX1-210ENST00000560260 LINC00114Q6XXX2 140 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 B3GNT6Q6ZMB0 384 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 P3H2Q8IVL5 708 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 C9orf106Q8NAJ2 232 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 ELOA3Q8NG57 546 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 OSTF1Q92882 214 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 SLC41A3Q96GZ6 507 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 CCDC120Q96HB5 630 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 PRRC1Q96M27 445 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 UCN2Q96RP3 112 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 STOML1Q9UBI4 398 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 SLC7A7Q9UM01 511 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 ENPP4Q9Y6X5 453 aa19.52■□□□□ 0.72
SNX1-210ENST00000560260 A0A1B0GUH1 482 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 CD8B2A6NJW9 211 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 hCG_2039718K7EN88 272 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 RNF224P0DH78 156 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 TAS2R41P59536 307 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 RPS3AP61247 264 aaKnown RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 PON3Q15166 354 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 TMPPEQ6ZT21 453 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 FNDC9Q8TBE3 224 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 RNF217Q8TC41 542 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 PTDSS2Q9BVG9 487 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 NDUFAF4Q9P032 175 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 RHCGQ9UBD6 479 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 RIMS3Q9UJD0 308 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 SLC5A6Q9Y289 635 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 NCOA6Q14686 2063 aaPredicted RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 MBD3L4A6NDZ8 208 aaPredicted RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 MBD3L3A6NE82 208 aaPredicted RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 MBD3L5A6NJ08 208 aaPredicted RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 A8MVM7 634 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 AQP8O94778 261 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 DIRAS1O95057 198 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 HOXD4P09016 255 aaPredicted RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 PNMTP11086 282 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 DIO1P49895 249 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 ZNF239Q16600 458 aaKnown RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 NKAIN4Q8IVV8 208 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 NAXEQ8NCW5 288 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 MBD3L2Q8NHZ7 208 aaPredicted RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 STK35Q8TDR2 534 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 DDIT4LQ96D03 193 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 KTI12Q96EK9 354 aaPredicted RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 ZNF426Q9BUY5 554 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 POLR2J2Q9GZM3 115 aaKnown RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 POLR2J3Q9H1A7 115 aaKnown RBP19.51■□□□□ 0.71
SNX1-210ENST00000560260 CALHM2Q9HA72 323 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 MAN2C1Q9NTJ4 1040 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 HDGFL3Q9Y3E1 203 aa19.51■□□□□ 0.71
SNX1-210ENST00000560260 HELZ2Q9BYK8 2649 aaKnown RBP19.5■□□□□ 0.71
SNX1-210ENST00000560260 MYO7BQ6PIF6 2116 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 DOCK7Q96N67 2140 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 IGHV3-15A0A0B4J1V0 119 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 CLEC18AA5D8T8 446 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 PMS2P2O95744 297 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 CLK1P49759 484 aaKnown RBP19.5■□□□□ 0.71
SNX1-210ENST00000560260 ERFP50548 548 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 MAP2K6P52564 334 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 CARD18P57730 90 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 PMPCAQ10713 525 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 FLOT2Q14254 428 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 SGCBQ16585 318 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 PDSS1Q5T2R2 415 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 C1orf140Q5VVS0 124 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 CLEC18BQ6UXF7 455 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 OFCC1Q8IZS5 231 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 CLEC18CQ8NCF0 446 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 ZNF300Q96RE9 604 aaPredicted RBP19.5■□□□□ 0.71
SNX1-210ENST00000560260 SEPHS2Q99611 448 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 POTEKPQ9BYX7 375 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 SELENONQ9NZV5 590 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 ZNF175Q9Y473 711 aa19.5■□□□□ 0.71
SNX1-210ENST00000560260 SLC22A20A6NK97 555 aa19.49■□□□□ 0.71
SNX1-210ENST00000560260 ZNF814B7Z6K7 855 aa19.49■□□□□ 0.71
SNX1-210ENST00000560260 SMAD9O15198 467 aaKnown RBP19.49■□□□□ 0.71
SNX1-210ENST00000560260 IDUAP35475 653 aa19.49■□□□□ 0.71
SNX1-210ENST00000560260 FOXD4Q12950 439 aaPredicted RBP19.49■□□□□ 0.71
SNX1-210ENST00000560260 CHMP1BQ7LBR1 199 aa19.49■□□□□ 0.71
SNX1-210ENST00000560260 ADGRG5Q8IZF4 528 aa19.49■□□□□ 0.71
SNX1-210ENST00000560260 TMEM255BQ8WV15 326 aa19.49■□□□□ 0.71
SNX1-210ENST00000560260 ROBO4Q8WZ75 1007 aa19.49■□□□□ 0.71
SNX1-210ENST00000560260 WNT2BQ93097 391 aa19.49■□□□□ 0.71
SNX1-210ENST00000560260 LRGUKQ96M69 825 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms