RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 H3BSA7 217 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 CDC42EP2O14613 210 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 SNPHO15079 494 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 NEURL1O76050 574 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 WISP1O95388 367 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 SOX14O95416 240 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 TP53P04637 393 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 IGFBP1P08833 259 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 MAKP20794 623 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 S100A1P23297 94 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 CHMP24386 653 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 POU1F1P28069 291 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 HTR3AP46098 478 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 MASP1P48740 699 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 CCL11P51671 97 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 ZNF41P51814 821 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 POLR2HP52434 150 aaKnown RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 DLX5P56178 289 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 CRYZQ08257 329 aaKnown RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 IL18R1Q13478 541 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 POMZP3Q6PJE2 187 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 Q6ZPB1 254 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 RASSF6Q6ZTQ3 369 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 MINDY2Q8NBR6 621 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 CHPT1Q8WUD6 406 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 SNRNP27Q8WVK2 155 aaKnown RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 HRASLS5Q96KN8 279 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 TMEM43Q9BTV4 400 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 PTGES2Q9H7Z7 377 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 PLA2G3Q9NZ20 509 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 NDRG4Q9ULP0 352 aaKnown RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 VDAC3Q9Y277 283 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 PCDHGB6Q9Y5F9 930 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 PCDHGB5Q9Y5G0 923 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 GMPPBQ9Y5P6 360 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 ASPMQ8IZT6 3477 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 TMED7-TICAM2A0A0A6YYA0 188 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 TRIM64BA6NI03 449 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 H3BN98 237 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 ETV2O00321 342 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 TRIM3O75382 744 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 CCNA2P20248 432 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 CNR1P21554 472 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 DNASE1L1P49184 302 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 TPD52P55327 224 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 MFAP5Q13361 173 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 PTGES3Q15185 160 aaKnown RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 OR1C1Q15619 314 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 PLPPR5Q32ZL2 321 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 SLC25A53Q5H9E4 307 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 ZNF691Q5VV52 312 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 TIGD3Q6B0B8 471 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 KRT80Q6KB66 452 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 ADGRG3Q86Y34 549 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 KIF18BQ86Y91 864 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 C8orf59Q8N0T1 100 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 OR1J4Q8NGS1 313 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 C1GALT1C1Q96EU7 318 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 JSRP1Q96MG2 331 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 GNRHR2Q96P88 292 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 SIGLEC12Q96PQ1 595 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 PITX2Q99697 317 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 DOK1Q99704 481 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 YTHDF1Q9BYJ9 559 aaKnown RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 ZNF552Q9H707 407 aaPredicted RBP10.18□□□□□ -0.78
USP3-218ENST00000560202 TMED7Q9Y3B3 224 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 A0A0G2JMM0 328 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 A0A1W2PPB8 328 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 A0A1W2PRS3 328 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 FUOMA2VDF0 154 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 OR5H15A6NDH6 313 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 UNC119BA6NIH7 251 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 ZAR1LA6NP61 321 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 KIR3DP1A8MWS1 328 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 EFCAB9A8MZ26 197 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 FAM47E-STBD1D6RA91 191 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 SLC25A12O75746 678 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 IGF2P01344 180 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 OCM2P0CE71 109 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 OCMP0CE72 109 aaPredicted RBP10.17□□□□□ -0.78
USP3-218ENST00000560202 SAGP10523 405 aaPredicted RBP10.17□□□□□ -0.78
USP3-218ENST00000560202 FUT1P19526 365 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 APOBEC1P41238 236 aaKnown RBP10.17□□□□□ -0.78
USP3-218ENST00000560202 ID4P47928 161 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 BCAP31P51572 246 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 EGR4Q05215 589 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 FOXF1Q12946 379 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 MOGQ16653 247 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 NDUFA5Q16718 116 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 TMEM236Q5W0B7 351 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 LINC00299Q6ZSB3 139 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 THAP5Q7Z6K1 395 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 FDCSPQ8NFU4 85 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 FAM122AQ96E09 287 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 SGTBQ96EQ0 304 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 MRGPRX4Q96LA9 322 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 NPAS1Q99742 590 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 APOL4Q9BPW4 351 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 TUBA1CQ9BQE3 449 aa10.17□□□□□ -0.78
USP3-218ENST00000560202 RNF32Q9H0A6 362 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms