RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 NPIPB7O75200 414 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 STAMBPO95630 424 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 TAS2R41P59536 307 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 MYBPHQ13203 477 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 NCCRP1Q6ZVX7 275 aaPredicted RBP19.45■□□□□ 0.7
SNX1-206ENST00000559389 TSEN54Q7Z6J9 526 aaKnown RBP19.45■□□□□ 0.7
SNX1-206ENST00000559389 MBD3L2Q8NHZ7 208 aaPredicted RBP19.45■□□□□ 0.7
SNX1-206ENST00000559389 STK35Q8TDR2 534 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 SLC41A3Q96GZ6 507 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 SRXN1Q9BYN0 137 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 CALHM2Q9HA72 323 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 SLC7A7Q9UM01 511 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 A4GNTQ9UNA3 340 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 ZNF175Q9Y473 711 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 ENPP4Q9Y6X5 453 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 IGKV1D-42A0A075B6H8 117 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 GLI4P10075 376 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 VLDLRP98155 873 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 PIN1Q13526 163 aaPredicted RBP19.44■□□□□ 0.7
SNX1-206ENST00000559389 FLOT2Q14254 428 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 SGCBQ16585 318 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 ZNF239Q16600 458 aaKnown RBP19.44■□□□□ 0.7
SNX1-206ENST00000559389 PLXDC2Q6UX71 529 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 WDR88Q6ZMY6 472 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 GDF7Q7Z4P5 450 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 OFCC1Q8IZS5 231 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 RNF217Q8TC41 542 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 OSTF1Q92882 214 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 CPNE4Q96A23 557 aaPredicted RBP19.44■□□□□ 0.7
SNX1-206ENST00000559389 CCDC120Q96HB5 630 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 C7orf34Q96L11 122 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 LRGUKQ96M69 825 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 POTEKPQ9BYX7 375 aa19.44■□□□□ 0.7
SNX1-206ENST00000559389 ERRFI1Q9UJM3 462 aaPredicted RBP19.44■□□□□ 0.7
SNX1-206ENST00000559389 ARHGAP21Q5T5U3 1957 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 SLC22A20A6NK97 555 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 PRSS23O95084 383 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 PMS2P2O95744 297 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 THRBP10828 461 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 DIO1P49895 249 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 NUP107P57740 925 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 RAC3P60763 192 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 EGR4Q05215 589 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 PON3Q15166 354 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 IQCCQ4KMZ1 466 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 TMEM211Q6ICI0 200 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 MTFR2Q6P444 385 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 C5orf46Q6UWT4 87 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 LINC00114Q6XXX2 140 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 TMPPEQ6ZT21 453 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 FNDC9Q8TBE3 224 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 WNT2BQ93097 391 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 POP5Q969H6 163 aaKnown RBP19.43■□□□□ 0.7
SNX1-206ENST00000559389 MPP4Q96JB8 637 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 PRSS27Q9BQR3 290 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 TMEM43Q9BTV4 400 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 ZNF426Q9BUY5 554 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 TIGARQ9NQ88 270 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 NDUFAF4Q9P032 175 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 RIMS3Q9UJD0 308 aa19.43■□□□□ 0.7
SNX1-206ENST00000559389 PHF3Q92576 2039 aaKnown RBP19.42■□□□□ 0.7
SNX1-206ENST00000559389 CLEC18AA5D8T8 446 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 AQP12BA6NM10 295 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 J3KTA2 159 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 hCG_2039718K7EN88 272 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 FFAR1O14842 300 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 TOXO94900 526 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 AHSA1O95433 338 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 TGM6O95932 706 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 IMPDH2P12268 514 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 FCGR2AP12318 317 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 IDUAP35475 653 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 TIMP3P35625 211 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 YAP1P46937 504 aaKnown RBP19.42■□□□□ 0.7
SNX1-206ENST00000559389 CARD18P57730 90 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 CSNK2A1P68400 391 aaPredicted RBP19.42■□□□□ 0.7
SNX1-206ENST00000559389 ADORA2A-AS1P86434 159 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 RIPPLY2Q5TAB7 128 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 C1orf140Q5VVS0 124 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 CLEC18BQ6UXF7 455 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 YTHDF3Q7Z739 585 aaKnown RBP19.42■□□□□ 0.7
SNX1-206ENST00000559389 AQP12AQ8IXF9 295 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 C9orf106Q8NAJ2 232 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 CLEC18CQ8NCF0 446 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 UTP4Q969X6 686 aaKnown RBP19.42■□□□□ 0.7
SNX1-206ENST00000559389 DNAJA3Q96EY1 480 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 ZNF300Q96RE9 604 aaPredicted RBP19.42■□□□□ 0.7
SNX1-206ENST00000559389 PTDSS2Q9BVG9 487 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 MAGIXQ9H6Y5 334 aa19.42■□□□□ 0.7
SNX1-206ENST00000559389 MCTS1Q9ULC4 181 aaKnown RBP19.42■□□□□ 0.7
SNX1-206ENST00000559389 SULT2B1O00204 365 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 DNPH1O43598 174 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 AQP8O94778 261 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 SYNGR4O95473 234 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 PER3P56645 1201 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 SRSF1Q07955 248 aaKnown RBP eCLIP19.41■□□□□ 0.7
SNX1-206ENST00000559389 ST3GAL3Q11203 375 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 CYP4Z1Q86W10 505 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 TM9SF2Q99805 663 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 IL1RAPQ9NPH3 570 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms