RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ADA2Q9NZK5 511 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 JKAMPQ9P055 326 aa10.22□□□□□ -0.77
SNX1-204ENST00000559061 FREM1Q5H8C1 2179 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 A0A1W2PNV4 684 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 CPSF4LA6NMK7 179 aaKnown RBP10.21□□□□□ -0.77
SNX1-204ENST00000559061 FAM90A27PA6NNH2 459 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 FFAR1O14842 300 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 ARPC2O15144 300 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 FMO6PO60774 539 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 PDE5AO76074 875 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 PRSS23O95084 383 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 SERPINA1P01009 418 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 CGAP01215 116 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 TCN1P20061 433 aaPredicted RBP10.21□□□□□ -0.77
SNX1-204ENST00000559061 COL8A1P27658 744 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 CHRNB4P30926 498 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 NTF4P34130 210 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 HTR3AP46098 478 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 PER3P56645 1201 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 CARD18P57730 90 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 SELENOWP63302 87 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 LSM11P83369 360 aaKnown RBP eCLIP10.21□□□□□ -0.77
SNX1-204ENST00000559061 H3F3AP84243 136 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 LTBQ06643 244 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 BNIP1Q12981 228 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 ENTPD8Q5MY95 495 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 MTFR2Q6P444 385 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 TMPPEQ6ZT21 453 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 BHLHE22Q8NFJ8 381 aaPredicted RBP10.21□□□□□ -0.77
SNX1-204ENST00000559061 OR52E4Q8NGH9 312 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 SLC25A43Q8WUT9 341 aaPredicted RBP10.21□□□□□ -0.77
SNX1-204ENST00000559061 SLC38A4Q969I6 547 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 KTI12Q96EK9 354 aaPredicted RBP10.21□□□□□ -0.77
SNX1-204ENST00000559061 ZNF559Q9BR84 538 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 ZNF426Q9BUY5 554 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 AMBRA1Q9C0C7 1298 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 MAN2C1Q9NTJ4 1040 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 SEC14L4Q9UDX3 406 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 CLEC4AQ9UMR7 237 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 A4GNTQ9UNA3 340 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 SH3GLB1Q9Y371 365 aa10.21□□□□□ -0.77
SNX1-204ENST00000559061 ASH1LQ9NR48 2969 aaKnown RBP10.21□□□□□ -0.78
SNX1-204ENST00000559061 A0A087WUJ7 227 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 TCRBV5S2A0A599 114 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 LIPT2A6NK58 231 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 J3KTA2 159 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 SS18L1O75177 396 aaPredicted RBP10.2□□□□□ -0.78
SNX1-204ENST00000559061 CLDN14O95500 239 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 PMS2P2O95744 297 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 TMIGD3P0DMS9 266 aaPredicted RBP10.2□□□□□ -0.78
SNX1-204ENST00000559061 IGFBP2P18065 325 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 ME2P23368 584 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 RAC3P60763 192 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 MS4A2Q01362 244 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 ALG10BQ5I7T1 473 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 SAMD4BQ5PRF9 694 aaKnown RBP10.2□□□□□ -0.78
SNX1-204ENST00000559061 GLYATQ6IB77 296 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 XKRXQ6PP77 449 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 C16orf89Q6UX73 402 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 BTLAQ7Z6A9 289 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 ADAMTS16Q8TE57 1224 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 STARD4Q96DR4 205 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 TPD52L3Q96J77 140 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 HSH2DQ96JZ2 352 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 ZNF300Q96RE9 604 aaPredicted RBP10.2□□□□□ -0.78
SNX1-204ENST00000559061 TM9SF2Q99805 663 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 PSD2Q9BQI7 771 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 TRIM2Q9C040 744 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 C1orf21Q9H246 121 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 ARMC7Q9H6L4 198 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 GORASP2Q9H8Y8 452 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 C12orf10Q9HB07 376 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 CACYBPQ9HB71 228 aaKnown RBP10.2□□□□□ -0.78
SNX1-204ENST00000559061 DCAF13Q9NV06 445 aaKnown RBP10.2□□□□□ -0.78
SNX1-204ENST00000559061 HDGFL3Q9Y3E1 203 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 HECTD1Q9ULT8 2610 aa10.2□□□□□ -0.78
SNX1-204ENST00000559061 GJE1A6NN92 205 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 ZNF716A6NP11 495 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 HSPB2A8KAH6 182 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 LRRN3E7EW58 273 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 CYTIPO60759 359 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 IL18BPO95998 194 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 UQCRBP14927 111 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 BMP5P22003 454 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 CTSSP25774 331 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 AGTR1P30556 359 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 SLC7A1P30825 629 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 SMSP52788 366 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 RPS3AP61247 264 aaKnown RBP10.19□□□□□ -0.78
SNX1-204ENST00000559061 PIN1Q13526 163 aaPredicted RBP10.19□□□□□ -0.78
SNX1-204ENST00000559061 HSPB2Q16082 182 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 C1orf140Q5VVS0 124 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 PGM2L1Q6PCE3 622 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 ZNF613Q6PF04 617 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 ULK3Q6PHR2 472 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 FCRLAQ7L513 359 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 GDF7Q7Z4P5 450 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 RANBP3LQ86VV4 465 aaPredicted RBP10.19□□□□□ -0.78
SNX1-204ENST00000559061 NKAIN4Q8IVV8 208 aa10.19□□□□□ -0.78
SNX1-204ENST00000559061 CCDC103Q8IW40 242 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms