RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 STX7O15400 261 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 TNFSF12O43508 249 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 FCMRO60667 390 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 KHDRBS3O75525 346 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 MTRF1O75570 445 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 TOXO94900 526 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 LDOC1O95751 146 aaPredicted RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 PRSS1P07477 247 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 CD48P09326 243 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 ERVK-10P10266 1014 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 DBTP11182 482 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 GALP22466 123 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 RPL9P32969 192 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 TSFMP43897 325 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 PGFP49763 221 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 SUCLG1P53597 346 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 RPL23AP62750 156 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 DHODHQ02127 395 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 BST1Q10588 318 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 ILF3Q12906 894 aaKnown RBP eCLIP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 FAM189A2Q15884 450 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 GGTA1PQ4G0N0 100 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 CELF3Q5SZQ8 465 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 AGAP7PQ5VUJ5 663 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 METAP1DQ6UB28 335 aaPredicted RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 ATRAIDQ6UW56 229 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 LANCL3Q6ZV70 420 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 ZNF771Q7L3S4 317 aaPredicted RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 ACOT1Q86TX2 421 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 C18orf25Q96B23 403 aaPredicted RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 TADA1Q96BN2 335 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 RASD2Q96D21 266 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 SH3YL1Q96HL8 342 aaPredicted RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 AGAP4Q96P64 663 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 ALKBH3Q96Q83 286 aaPredicted RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 NPY6RQ99463 290 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 TTYH2Q9BSA4 534 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 FAM192AQ9GZU8 254 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 SLC25A51Q9H1U9 297 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 MTHFD2LQ9H903 347 aaPredicted RBP4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 Q9HAA7 133 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 IL1RL2Q9HB29 575 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 RAB20Q9NX57 234 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 PIPOXQ9P0Z9 390 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 ONECUT1Q9UBC0 465 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 RNF7Q9UBF6 113 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 GNG12Q9UBI6 72 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 SEC14L3Q9UDX4 400 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 RPH3ALQ9UNE2 315 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 PPP1R3CQ9UQK1 317 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 WDR19Q8NEZ3 1342 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 HERC1Q15751 4861 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 NOTCH4Q99466 2003 aa4.11□□□□□ -1.75
MTHFD1-216ENST00000557539 IQCMA0A1B0GVH7 501 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 FAM240BA0A1B0GVZ2 78 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 C15orf61A6NNL5 157 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 ZNF724A8MTY0 619 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 FOXE1O00358 373 aaPredicted RBP4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 P2RY10O00398 339 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 ZNF264O43296 627 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 SMAD6O43541 496 aaKnown RBP4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 TPST2O60704 377 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 STX11O75558 287 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 VENTXO95231 258 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 GZMAP12544 262 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 CD1DP15813 335 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 LAP3P28838 519 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 FNTAP49354 379 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 EWSR1Q01844 656 aaKnown RBP eCLIP4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 ARL16Q0P5N6 197 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 EMC2Q15006 297 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 TGIF1Q15583 401 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 UBE2V2Q15819 145 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 ECSCRQ19T08 205 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 PRAMEF20Q5VT98 475 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 SLX4IPQ5VYV7 408 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 BTNL3Q6UXE8 466 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 HACD2Q6Y1H2 254 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 C1QL2Q7Z5L3 287 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 TSEN54Q7Z6J9 526 aaKnown RBP4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 TMEM17Q86X19 198 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 CATSPERDQ86XM0 798 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 MFSD6LQ8IWD5 586 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 STXBP6Q8NFX7 210 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 OR10V1Q8NGI7 309 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 PCNPQ8WW12 178 aaKnown RBP4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 ZNF524Q96C55 264 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 COQ2Q96H96 371 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 AMDHD1Q96NU7 426 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 TGM7Q96PF1 710 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 TNFRSF13CQ96RJ3 184 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 SLC39A3Q9BRY0 314 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 GPR174Q9BXC1 333 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 SGK2Q9HBY8 427 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 MCCC2Q9HCC0 563 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 GLRX2Q9NS18 164 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 RGS18Q9NS28 235 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 UFSP2Q9NUQ7 469 aa4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 MRPS18CQ9Y3D5 142 aaKnown RBP4.1□□□□□ -1.75
MTHFD1-216ENST00000557539 CSNK1G3Q9Y6M4 447 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms