RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SLC9A3P48764 834 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TUFMP49411 452 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 RPS24P62847 133 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ABATP80404 500 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ARF5P84085 180 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 GALK2Q01415 458 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 MRPL28Q13084 256 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ILKQ13418 452 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TNK1Q13470 666 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ARHGEF6Q15052 776 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 PTGES3Q15185 160 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 SPHARQ15513 63 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CHRNA6Q15825 494 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 SSX1Q16384 188 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 NDUFA9Q16795 377 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TMEM44Q2T9K0 475 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 GLYR1Q49A26 553 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CCDC58Q4VC31 144 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF585BQ52M93 769 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 SLC25A30Q5SVS4 291 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 HECTD3Q5T447 861 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 MFSD4BQ5TF39 518 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 NXNL2Q5VZ03 156 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TRIQKQ629K1 86 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 SIGIRRQ6IA17 410 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 FRMPD2BQ6IN97 320 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CASP12Q6UXS9 341 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 UNC5DQ6UXZ4 953 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TPGS1Q6ZTW0 290 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 BBS7Q8IWZ6 715 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ZDHHC23Q8IYP9 409 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 SLC22A15Q8IZD6 547 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CLECL1Q8IZS7 167 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 IQCF1Q8N6M8 205 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 NATD1Q8N6N6 113 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 DCAF4L2Q8NA75 395 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 C19orf18Q8NEA5 215 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TET1Q8NFU7 2136 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 OR4N2Q8NGD1 307 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 OR8J1Q8NGP2 316 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CDC26Q8NHZ8 85 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 GPR151Q8TDV0 419 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ADAMTS14Q8WXS8 1223 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CNOT9Q92600 299 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TMEM18Q96B42 140 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 AP2M1Q96CW1 435 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ALG14Q96F25 216 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 PPP1R16AQ96I34 528 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 KCTD7Q96MP8 289 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 OR5M11Q96RB7 305 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 MCCC1Q96RQ3 725 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 LYSMD1Q96S90 227 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 NIPSNAP1Q9BPW8 284 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 DHRS9Q9BPW9 319 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 GTPBP2Q9BX10 602 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 UCK2Q9BZX2 261 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ROGDIQ9GZN7 287 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 NPFFR1Q9GZQ6 430 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 HHATLQ9HCP6 504 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 AMBNQ9NP70 447 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 IL26Q9NPH9 171 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ABCB8Q9NUT2 735 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 BEX4Q9NWD9 120 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 PTTG3PQ9NZH4 202 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 HCN3Q9P1Z3 774 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 DIMT1Q9UNQ2 313 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 GSTK1Q9Y2Q3 226 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 LSM2Q9Y333 95 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 OR51B4Q9Y5P0 310 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 PRSS21Q9Y6M0 314 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 SCN5AQ14524 2016 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 DNAH12Q6ZR08 3092 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 DSPPQ9NZW4 1301 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 GNG14A0A1W2PPG7 69 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TRBC2A0A5B9 178 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TMEM129A0AVI4 362 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 GAGE10A6NGK3 116 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 OR6C70A6NIJ9 312 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 GABRR3A8MPY1 467 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 KDM4EB2RXH2 506 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 C5orf58C9J3I9 102 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TSPAN4O14817 238 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SLC30A4O14863 429 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 POLR1CO15160 346 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SSX4O60224 188 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 TPST2O60704 377 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 SLC19A2O60779 497 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 NOS1APO75052 506 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF780AO75290 641 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ENTPD6O75354 484 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CSO75390 466 aaKnown RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CDRT1O95170 752 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 RAB36O95755 333 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CATP04040 527 aaKnown RBP4.31□□□□□ -1.72
ATXN3-246ENST00000557030 RB1P06400 928 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 CHRM4P08173 479 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 IRF1P10914 325 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 ACADMP11310 421 aa4.31□□□□□ -1.72
ATXN3-246ENST00000557030 GLULP15104 373 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms